Pedobacter endophyticus: IZT61_20830
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Entry
IZT61_20830 CDS
T07452
Name
(GenBank) bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
pex
Pedobacter endophyticus
Pathway
pex00300
Lysine biosynthesis
pex00470
D-Amino acid metabolism
pex00550
Peptidoglycan biosynthesis
pex01100
Metabolic pathways
pex01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
IZT61_20830
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IZT61_20830
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IZT61_20830
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
IZT61_20830
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pex01011
]
IZT61_20830
Enzymes [BR:
pex01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
IZT61_20830
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
IZT61_20830
Peptidoglycan biosynthesis and degradation proteins [BR:
pex01011
]
Precursor biosynthesis
Amino acid ligase
IZT61_20830
Racemase
IZT61_20830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase_C
RuvA_C
Motif
Other DBs
NCBI-ProteinID:
QPH39454
UniProt:
A0A7S9KZG8
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All DBs
Position
5114774..5117233
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AA seq
819 aa
AA seq
DB search
MQNPTYTVLKVAEILNADAKLVDEQRVVQYLVIDSRSILIPENSLFFALSSHRNGHDFIE
DAYIRGIRNFVITEHKYAHKYPDCNILIVSNALMALQQLAGYHRSQYNLKTIGITGSNGK
TIVKEWLYQLLAADENIVRSPKSYNSQIGVPLSVWQIQSENTLGIFEAGISGVNEMETLA
DIIQPQIGVLTNIGEAHAEGFHSKKEKLKEKLKLFKDAELFVYSPDYVTDFNFRDLPGKK
RFSWSSTRGADLRIIAVEPIAQNCYLRAIYLDREIECMLPFKDRASIENGMICWATLLAL
GYSPEQADERLERLSPVSMRLELKTGINQCSVIDDSYSADISSLAIALDFLNQQNQHPKK
TVILSELFETGRDDLHLYTEIAALLAQKKVDRLIGIGKHISNFAHLFNIEKAFFEDTSAF
IRNFPALHFNQETILVKGARRFEFAKISKLLTQKIHDTVLEINLNAMVNNLQFYRSKIKP
GVKIMAMVKAFSYGSGSFEVANLLQFHKVDYLAVAYADEGIALRKAGISLPIMVMSPEQS
AFDAIIKYRLEPEIYSLEILHSFNSALSDYDFDYPIHIKIDSGMHRLGFDDAEIDQLLPI
LTNAKQLKVQSIFSHLVASGEAEHDGFTQAQINKFTIISNQLIDVLGYQPLLHIANTSGI
SRWPGAQLDMVRLGIGLYGFDSVLTDNRGLQTTMALKTTVTQVKALTSGETVGYSRRGVL
PNGGTIATVKIGYADGYNRSFGNGVGKMIVNGHLVPTIGSICMDMTMLDVTGIDVKPGDE
AIVFNHERTIAQLAEQIGTIPYEILTNVSQRVKRIYFYE
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacccgacatacaccgttttaaaagttgcagaaatattaaatgccgatgctaaa
ttagttgatgaacagcgcgttgttcaatatttggtaattgatagccgctcgatcttgatt
ccagaaaattctttgttctttgccttgtcatcgcacagaaacgggcacgactttatcgaa
gacgcttacatcagggggattcggaattttgtaatcaccgagcataaatatgctcataaa
tatcctgattgcaatatcttaatcgtttcgaatgctttgatggccttacaacaactcgca
ggatatcatcgcagtcaatataatttaaaaaccatcggaataaccggaagtaatggaaaa
acgattgtaaaagaatggctgtaccaacttttagccgccgatgaaaatattgttcgaagc
cccaaaagctataactcacaaattggcgttccgttgtctgtatggcagattcagtccgaa
aatacgctggggatttttgaggcgggcatttcaggagtaaacgaaatggaaacgcttgca
gatattattcaacctcaaattggggtgttgaccaatattggcgaagcgcatgccgaaggt
tttcactcgaaaaaggaaaagctaaaagagaaacttaagctgtttaaagatgctgaactg
tttgtttattctccggactatgttactgatttcaacttcagagatttacccggaaaaaag
cgctttagctggagcagcacgcggggcgccgatctgcgcattattgctgttgaacccata
gcgcaaaactgttatttgagagcgatttacctggatagagagatcgaatgcatgttgcca
tttaaagatcgtgcctcgatagaaaatggtatgatttgttgggcaaccttacttgcgcta
ggctactcgcccgaacaagccgatgaacggctcgaaagattaagccccgtaagtatgcgc
ctggaacttaaaactggtattaatcagtgctcggttatcgacgattcgtacagtgccgat
atttcttcgctcgccattgccctcgattttctcaatcagcaaaaccagcatcccaagaaa
acggtaattttatcagaattatttgaaaccggacgggatgacctgcatttatataccgaa
attgccgcattgttggcgcaaaaaaaggtcgaccgattgataggcattggaaaacatatt
tcaaattttgcccaccttttcaacatcgagaaagcattttttgaagacaccagcgctttc
atcaggaattttccggcattgcatttcaatcaggaaaccattttggtaaaaggggcccgg
cgcttcgagtttgccaaaatcagtaagctgcttacccagaaaattcacgatacggtgctc
gaaattaacctgaatgcgatggttaacaatttgcagttttatcgttcaaaaataaagccc
ggcgttaaaattatggcaatggtaaaggctttttcgtatggaagcgggagtttcgaggtc
gccaatttactgcaatttcataaagttgattatttggctgttgcttatgccgatgagggc
attgctttgcgcaaggcaggtattagcctgccaattatggtcatgagtcctgagcaatct
gcttttgatgccattataaaatacaggctcgagcccgaaatttacagcctcgaaatcctt
catagttttaattcggccctttcagattatgattttgactatcctatccatataaaaatc
gacagcggcatgcatcgtttaggcttcgatgatgctgaaattgaccagctcttgccgata
ctaacaaatgcgaaacaattaaaggttcaaagcattttttcgcatcttgtagccagtggc
gaagcagagcacgatggttttacacaggcgcaaatcaataagtttaccatcatttcaaat
cagctgatagatgttttgggctatcaaccgttattgcatatagccaatacttcgggcatt
agtcgctggccaggtgctcagctagatatggtgcgtttgggaattggtctgtacggcttc
gactcggtgctgaccgacaatcgcgggcttcaaaccacaatggccctgaaaacaaccgta
acccaggtgaaagcgttaaccagcggtgaaacagtcggctatagcaggagaggggtgttg
cccaacggcggtaccattgctacggttaaaatcggttacgccgacggttataatcgttcc
tttggaaatggcgtgggcaaaatgattgttaacggacatttagtgcctacaattggttct
atttgtatggatatgacgatgttggatgtgacggggattgacgtaaaaccgggcgatgag
gctattgttttcaatcatgaacgtacgattgcgcagctggccgaacaaattggtactatc
ccgtacgaaatcctgaccaacgtatcgcaaagggtaaaacggatttatttttatgaataa
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