Pedobacter endophyticus: IZT61_21650
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Entry
IZT61_21650 CDS
T07452
Name
(GenBank) lipid A deacylase LpxR family protein
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
pex
Pedobacter endophyticus
Pathway
pex00540
Lipopolysaccharide biosynthesis
pex01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
IZT61_21650
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pex01005
]
IZT61_21650
Lipopolysaccharide biosynthesis proteins [BR:
pex01005
]
Lipid A
IZT61_21650
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxR
Ntox23
Motif
Other DBs
NCBI-ProteinID:
QPH39611
UniProt:
A0A7S9KZZ4
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All DBs
Position
complement(5304999..5305946)
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AA seq
315 aa
AA seq
DB search
MKSLFITALLCFVTLTGFSQSFKNEFGFKTENDAYLATRNDRYYTNGLFIYFRRAIDSTK
YSSKIEKKTFEISVGQKMYTPYWGMVPKAENQDRPFAGYLYAGAAYAVFFNDESAIKTSV
ELGTVGPSSLAEKGQEFLHKTVGFYTPAGWEYQIKNEVAANLAANYSKLLIRSSDRSVDL
VGQGYANLGTTFSGLGASVLFRAGRLNQLFNSASYNAVIGNSRTEAFNKSEFFFYVKPQL
NFVAYDATIQGSLFNSNSPVTFGVKPIVFEQQFGVNYSSQRFTIDFNIIFKTREVKSSAK
AQNYGGLSLYYRFGR
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcactctttattaccgcgttgctctgcttcgttacgcttacaggctttagtcag
tcgtttaagaacgaatttggatttaaaactgaaaacgacgcctatttagccacccgaaat
gaccgttattacaccaacggactatttatttatttccgcagggcgatagattcaaccaaa
tattcatccaaaatagagaaaaagactttcgagatttcggtgggccaaaagatgtacacg
ccttactggggcatggtgccgaaggccgaaaatcaagaccggccctttgcgggttacctt
tacgccggcgcagcgtatgctgtcttttttaacgacgaaagcgcaattaaaaccagtgtt
gagttgggtactgtcggccccagttcattagccgaaaagggacaggagtttcttcataaa
acggtgggtttttatacgccagcgggctgggaatatcagataaaaaacgaagtagcagcc
aatttagcagccaactacagcaaacttctcattcgatcatcagatcgttccgttgatctt
gttggacaaggctatgcaaatttagggacgacgttttcggggcttggggcttctgtgcta
ttcagggccggaagactaaatcaattgttcaatagtgcatcatacaatgccgtaatcggc
aattcgagaaccgaggctttcaacaaatccgaatttttcttttatgtaaaaccacagctt
aactttgttgcgtacgatgcaaccattcagggcagcttgttcaatagtaacagtcccgta
acgtttggcgtaaaacctattgttttcgaacagcagtttggcgtaaactatagctcacaa
cgatttacgatagatttcaacattatttttaaaaccagggaagtgaagagttcggccaaa
gcgcaaaattatggcggcctgagtttgtattacaggtttggaaggtag
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