KEGG   Pedobacter endophyticus: IZT61_21765
Entry
IZT61_21765       CDS       T07452                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pex  Pedobacter endophyticus
Pathway
pex02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pex00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    IZT61_21765
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pex03021]
    IZT61_21765
Transcription machinery [BR:pex03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     IZT61_21765
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 Sigma70_r2 HTH_24 GerE DUF4391 HTH_Mga HTH_AsnC-type
Other DBs
NCBI-ProteinID: QPH41951
UniProt: A0A7S9L4H0
LinkDB
Position
5333453..5334037
AA seq 194 aa
MHPYHLCSDRELALLLTKGNEQAFTEVYNRFYGLLFIHASKRLNDDEEAKDVVHQLFESL
WLKRAQIDPDGNLSAYLYTAVRNRVLDVFAHQKVENKYVDSLQHFMDQDHVRTDHRVRER
QMAALIEQEIDALPPKMREIFILSRKANKTHREISEELGLSELTVKTQVKNALRILRSRL
GAVVYIAFILKIHQ
NT seq 585 nt   +upstreamnt  +downstreamnt
atgcatccttatcatttatgttcagatcgtgaattggcgttattgctcaccaagggtaac
gaacaggcttttaccgaggtttataatcggttttatggcttattgtttatccatgccagc
aagcgccttaacgatgatgaagaggcaaaggacgtggttcaccagctatttgagtcgctt
tggttaaaacgagcgcaaatcgaccccgatggaaacctttctgcttatttgtacaccgcg
gtcagaaatcgggtgttggatgtatttgcccatcaaaaggtagaaaataaatatgtcgat
tctcttcagcattttatggatcaggatcatgttcgtaccgatcatcgtgttcgggagcgg
caaatggctgctcttattgaacaggaaattgatgcactgcctcccaaaatgcgtgaaatt
tttattttaagtcgcaaagcaaacaaaacgcatcgggaaatttccgaagaactcggcctt
tctgaattaactgttaaaacacaggttaaaaatgcgctgcgtattttaagatcgcgcctc
ggtgcggttgtttacattgcatttatcctcaaaatacatcaataa

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