Pedobacter endophyticus: IZT61_21765
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Entry
IZT61_21765 CDS
T07452
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pex
Pedobacter endophyticus
Pathway
pex02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IZT61_21765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pex03021
]
IZT61_21765
Transcription machinery [BR:
pex03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IZT61_21765
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
HTH_24
GerE
DUF4391
HTH_Mga
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
QPH41951
UniProt:
A0A7S9L4H0
LinkDB
All DBs
Position
5333453..5334037
Genome browser
AA seq
194 aa
AA seq
DB search
MHPYHLCSDRELALLLTKGNEQAFTEVYNRFYGLLFIHASKRLNDDEEAKDVVHQLFESL
WLKRAQIDPDGNLSAYLYTAVRNRVLDVFAHQKVENKYVDSLQHFMDQDHVRTDHRVRER
QMAALIEQEIDALPPKMREIFILSRKANKTHREISEELGLSELTVKTQVKNALRILRSRL
GAVVYIAFILKIHQ
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgcatccttatcatttatgttcagatcgtgaattggcgttattgctcaccaagggtaac
gaacaggcttttaccgaggtttataatcggttttatggcttattgtttatccatgccagc
aagcgccttaacgatgatgaagaggcaaaggacgtggttcaccagctatttgagtcgctt
tggttaaaacgagcgcaaatcgaccccgatggaaacctttctgcttatttgtacaccgcg
gtcagaaatcgggtgttggatgtatttgcccatcaaaaggtagaaaataaatatgtcgat
tctcttcagcattttatggatcaggatcatgttcgtaccgatcatcgtgttcgggagcgg
caaatggctgctcttattgaacaggaaattgatgcactgcctcccaaaatgcgtgaaatt
tttattttaagtcgcaaagcaaacaaaacgcatcgggaaatttccgaagaactcggcctt
tctgaattaactgttaaaacacaggttaaaaatgcgctgcgtattttaagatcgcgcctc
ggtgcggttgtttacattgcatttatcctcaaaatacatcaataa
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