Pedobacter endophyticus: IZT61_21975
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Entry
IZT61_21975 CDS
T07452
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
pex
Pedobacter endophyticus
Pathway
pex00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pex00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
IZT61_21975
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pex01007
]
IZT61_21975
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pex03016
]
IZT61_21975
Enzymes [BR:
pex01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
IZT61_21975
Amino acid related enzymes [BR:
pex01007
]
Aminoacyl-tRNA synthetase
Class I (U)
IZT61_21975
Transfer RNA biogenesis [BR:
pex03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
IZT61_21975
Prokaryotic type
IZT61_21975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
DUF3144
Motif
Other DBs
NCBI-ProteinID:
QPH39669
UniProt:
A0A7S9KZF0
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All DBs
Position
5382381..5385071
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AA seq
896 aa
AA seq
DB search
MSISTKYNPAETEDKWYSYWLSKKFFHSEPDEREPYTIVIPPPNVTGVLHMGHMLNNTIQ
DVLIRKARMEGKNACWVPGTDHASIATEAKVVAMLKEQGINKKDLSREEFLKYAWEWKEK
YGGIILEQLKKLGASCDWDRTRFTMEEDLSEAVIDSFIHLYKKGWIYRGIRMVNWDPAGK
TAVSDEEVIRKEVNQKLYYIRYTIADAGAPNSELQTPNYLVVATTRPETIMADAAICINP
NDERFAHLKGKKVFVPLVNHEIPVIEDEYVDIEFGTGCLKVTPAHDLNDYELGVKHNLPV
TDILNDDGTLNELAVILVGEDRFVARKKIAKMLEEAGHLDKVEDYKSQVGFSERTDAAIE
PKLSMQWFVKMKELAQPALEDVVKGEVNLIPNKFENTYRHWMENVRDWNISRQLWWGQRI
PAWYDDKGNWVVAKTKDEALEEFWKKKHLDESCSETEKAGFKHQLEPFLKQDDDVMDTWF
SSWLWPISVFDGFKNPDNKDINYYYPTNDLVTAPEILFFWVARMIMAGREFMGKKPFTNV
YLTGIVRDKLGRKMSKSLGNSPDPIGLIEKYGADAVRVGMLMSSPAGNDLMFDESYCEQG
RNFASKIWNAFRLVKGWEVDANLENPNLQAISWFENRFNQTLVEIENDFKQYRLSEALMT
IYKLVWDDFCAWYLEMVKPAYQQPIDAETYKATIGFFEQIIRLLHPNMPFLTEELWHDDL
FGTRDEMDCCIVAQFPKGGAIDEQLLKDAEVVKTVVAEIRNIRNQKQISPKESLPLSLKI
NSGIDYEKWMNIIYKLGNVSGAEIVVDKIAGAAAFMAGKDEFFIRLTENVDVEAERIRLN
ADLVYLQGFLKSVDAKLSNERFVQNAKPEVVANEQNKKADAEAKIKIIEESLAMLG
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgagcatttccaccaagtacaatcctgcagaaaccgaagataaatggtatagctactgg
ctatcgaaaaaattttttcactcagagcccgatgagcgtgagccttacaccattgtaatt
ccgccgcccaacgttaccggagtgttgcacatgggccatatgttaaacaataccatacag
gatgttttgatccgtaaggcacgtatggaaggcaaaaatgcttgctgggttcccggaacc
gatcacgcatcaattgctaccgaagcaaaggttgtggccatgttgaaagaacagggcatt
aacaaaaaagatctttcgcgtgaggagtttttaaagtatgcctgggaatggaaagaaaaa
tatggcggcattattttagagcagttaaagaaacttggcgcaagttgcgattgggaccgt
acgcgatttacgatggaagaagacctttctgaagctgtgatcgattcgtttatccatttg
tataaaaaaggatggatttatcgcggcattcgtatggtaaactgggatccggccggaaaa
actgccgtttctgacgaagaagttatccgtaaggaagttaaccagaagctgtattatatc
cgctatactattgcggatgcgggagcgccaaactccgaactccaaactccgaactacctt
gttgttgccaccacccgcccggaaacgataatggccgatgctgcaatttgtatcaacccg
aacgatgagcgctttgcgcacttaaagggtaaaaaagtgtttgtgccactcgttaaccac
gaaattccggttattgaggatgaatatgttgatattgaattcggtaccggttgtttaaag
gttacgccagcacacgatctgaatgattatgaactgggcgtaaagcacaatttgccggta
accgacattttaaacgacgatggaaccttaaacgaacttgccgttattttggtgggcgaa
gaccggtttgtggcccgtaaaaaaatcgccaaaatgttggaggaagccgggcatttagat
aaagtggaggattataaatcgcaggttggtttttctgaacgtaccgatgcggcaattgaa
cccaaactttcgatgcaatggtttgtgaaaatgaaagaattggcgcagcctgctttggaa
gatgttgtaaaaggagaggttaacctgattccgaataaatttgaaaatacataccgccat
tggatggagaacgttcgcgattggaacatttctcgacagctttggtggggacagcgcatc
ccggcttggtacgacgacaaaggaaactgggttgttgcaaaaaccaaagatgaagcgttg
gaagagttctggaagaaaaagcatttagacgaaagctgctcggaaactgaaaaagctgga
ttcaagcatcaattagagccttttttaaagcaagacgatgatgtgatggacacatggttt
tcatcgtggttgtggccgatttccgttttcgatggatttaaaaaccccgataacaaagat
attaactactattatccaaccaacgatttggttacggcgccagagattttgttcttttgg
gtggcccgaatgattatggccggacgagagtttatgggcaaaaagccatttaccaatgtt
tacctcactggtattgttcgtgataaactgggacgtaaaatgtctaaatcgttaggtaat
tcgccagatccaattggtttgatcgaaaaatatggcgccgatgcggttcgtgttggtatg
ctcatgtcgtcgcctgcaggcaacgatttaatgttcgatgaaagctactgtgaacaggga
cgtaattttgcatcaaaaatatggaatgcctttcgcctggtgaaaggttgggaagttgac
gcgaatttggagaacccaaatttacaggccatttcgtggtttgaaaatcgctttaaccaa
actttagtagaaattgaaaatgacttcaaacaatatcgtttgtcggaggctttaatgacc
atttacaagctggtttgggacgatttctgtgcctggtatctagaaatggtgaagccagct
taccaacagccaattgatgctgaaacgtacaaagctacaattgggttttttgagcagatt
atcagattgttgcatccaaatatgcctttcctgacggaagaattatggcacgacgatttg
tttggtacccgcgatgaaatggactgttgtattgtggcgcagtttccgaaaggtggcgca
attgacgaacaactattgaaagatgctgaggtagtaaaaacagttgttgccgaaatcaga
aacattcgtaatcaaaagcagatttcgccgaaagagtctttaccattaagcttaaaaatt
aactccggcatcgactacgaaaagtggatgaacatcatctacaaactcggcaatgtttct
ggtgccgaaatagttgtcgataaaattgccggtgcagctgcttttatggccggaaaggac
gaattttttattcgtttaactgaaaatgttgatgtggaggcagaacgaatccgtttaaac
gcagacctggtgtatttgcagggtttcttaaaatctgttgatgccaaactgagtaacgag
cgtttcgtgcaaaatgcaaagcccgaagtggtagccaatgagcagaacaaaaaggccgat
gcagaagcgaagatcaagattattgaggaaagtttggccatgttaggataa
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