Pseudomonas extremorientalis: LUU92_27935
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Entry
LUU92_27935 CDS
T11956
Symbol
xerC
Name
(GenBank) tyrosine recombinase XerC
KO
K03733
integrase/recombinase XerC
Organism
pext Pseudomonas extremorientalis
Brite
KEGG Orthology (KO) [BR:
pext00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pext03036
]
LUU92_27935 (xerC)
Chromosome and associated proteins [BR:
pext03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
LUU92_27935 (xerC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Tyr_recomb_halo_M
Phage_int_SAM_4
DUF3549
HTH_SB
Motif
Other DBs
NCBI-ProteinID:
UUN88621
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All DBs
Position
6143318..6144217
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AA seq
299 aa
AA seq
DB search
MERQLDAYCAHLRNERQVSPHTLEAYRRDLNKVLAYCEKQQISSWKALDIQGLRSLIARL
HQAGQSSRSLSRLLSAVRGLYHYLNREGLCDHDPANGLSPPKGERRLPKTLDTDRALQLL
DGAVEDDFLAHRDQAILELFYSSGLRLSELTGLNLDQLDLADGLVQVLGKGSKTRVLPVG
RKAREALQLWLPLRLLTNPADDAVFVSQQGRRLGPRAIQVRVKAAGERELGQNLHPHMLR
HSFASHLLESSQDLRAVQELLGHSDIKTTQIYTHLDFQHLATVYDSAHPRAKRIKDGDS
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggaacggcaactggacgcttactgcgctcacctgcgcaacgagcgccaggtgtcgccc
cataccctggaagcctaccgacgggacttgaacaaggtcctggcctactgcgaaaaacaa
cagatcagcagctggaaggccctggatatccagggcctgcgcagcctgatcgcgcgactg
caccaggccggccaatcctcgcgcagcctgtcgcgcctgctctcggcggtgcgtgggctc
tatcactacctgaaccgtgaaggcctgtgcgaccacgacccggccaacggcctgtcgcca
cccaagggcgagcggcgcctgcccaagaccctggacactgaccgtgccctgcaactgttg
gacggtgcggtcgaggatgacttcctggcccatcgcgaccaagcgattctggaactgttc
tattcctcgggcctgcgcctttctgagctgaccggcctgaacctggatcaattggacctg
gcagacgggctggtgcaagtgctcggcaagggcagcaagacccgcgtcctaccggtaggc
cgcaaggcacgggaagcattgcagctgtggttgccgctgcgcctgctgaccaacccggcg
gacgatgcggtgttcgtcagccagcaaggccggcgtcttggacccagggcgattcaggtg
cgggtgaaggccgccggggagcgagagctggggcagaacctgcacccacatatgctgcga
cactctttcgccagccatctgctggaatcgtcccaggacctgcgcgccgtgcaagagcta
ctgggccactccgatatcaagaccacacagatctatacccatctggatttccaacacctg
gcaacggtgtacgacagcgcccacccaagggccaaacgcatcaaggacggcgactcatga
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