Pseudomonas extremorientalis: LUU92_28900
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Entry
LUU92_28900 CDS
T11956
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pext Pseudomonas extremorientalis
Pathway
pext02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pext00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LUU92_28900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pext03021
]
LUU92_28900
Transcription machinery [BR:
pext03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LUU92_28900
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_23
HTH_20
HTH_11
HTH_40
HTH_7
Trp_repressor
HTH_24
Annexin
DUF8040
TnsD
PhyR_sigma-like
HTH_Tnp_4
DUF7692
RWP-RK
DUF2774
Phage_antitermQ
DUF722
Motif
Other DBs
NCBI-ProteinID:
UUN88805
LinkDB
All DBs
Position
6361246..6361752
Genome browser
AA seq
168 aa
AA seq
DB search
MSSSSHTAAVQYIYEQHHSWLRGWLKGKLHNACDAADVAHDTFLRILGGRHAAQIVEPRD
YLATIARGLVIDRYRRNAIEQAYKQTLAERSEAITISEEDKAIIIETLVAVDKALSALGE
RARRIFMLSQVEGLTYQQIADQLQVSLTTVKKHMIRVLTECSLIMASL
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcttcttcacacacggctgcggtccagtacatttatgagcagcaccactcctgg
ctgcgcgggtggctcaaagggaagctacataacgcctgtgatgcggccgatgtggcgcac
gatacgttcttgcgcattctgggcgggcggcatgcggcacagatcgttgaaccacgtgac
tacctggcgaccatcgccagaggcctggtgattgatcgttaccgtcgaaacgccatcgaa
caggcctacaaacagaccctggccgaacggtctgaagccataaccatcagtgaagaagac
aaagccatcatcatcgagacgttggtggctgtggataaagccttgtctgcactcggcgag
cgagcgcggcggatattcatgctgtcccaggtcgaggggctgacttatcaacagattgcc
gatcagcttcaggtttcactgaccacggtgaagaagcacatgatccgtgtattgactgaa
tgctcactgatcatggccagcctgtaa
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integrated database retrieval system
