Pantoea eucalypti: EE896_06395
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Entry
EE896_06395 CDS
T06282
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
pey
Pantoea eucalypti
Brite
KEGG Orthology (KO) [BR:
pey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pey03400
]
EE896_06395
DNA repair and recombination proteins [BR:
pey03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
EE896_06395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
SLFN-g3_helicase
zf-tcix
DUF7577
AAA_22
Zn_ribbon_3
Zn_Ribbon_1
DZR
AAA_16
SNF2-rel_dom
TniB
AAA
Motif
Other DBs
NCBI-ProteinID:
QGF26496
LinkDB
All DBs
Position
complement(1375670..1377424)
Genome browser
AA seq
584 aa
AA seq
DB search
MSFTLRPYQQDAVNATVAHFRRHQEPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVAQNHSKYQAYGLEADIFAAGLQRKESQRKVVFGSVQSVARNLDQFDSAFSLVIVDECH
RIGDDKESQYQQIFNHLRQHNPQLRLLGLTATPFRLGKGWIYQFHYHGMVRGDEKSLFRD
CIYELPLRYMIKHQFLVPPERLDMPVVQYDFSRLTAQSNGLFSEADLNRELKQQQRVTPH
IIRQIVEFAEDRLGVMIFASTVEHAREILRLLPEKSALVSAETPARERDALILAFKAQQL
KFLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLSPGKTDCLILDYAGNPH
DLFTPEVGAPKGASDNQPVQVFCPACGFANTFWGKATEDGMVIEHFGRRCQGVLEDDEGE
REQCDFRFRFKSCPDCGAENDIAARHCHQCDKILVDPDDMLKAALKLKDALVLRCGGMTL
EQGHDAKGEWLKATYFDEEGTSVSERFRLQTPAQRKAFEQLFMRPHQRAPGVPLGWQTAA
DVLALQPLLRHPDFVVARAKGQFWQIREKMFDYQGRYRRANELR
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttaccttacgcccctatcaacaggatgcggtgaatgccaccgtggcgcatttc
cgtcgccatcaggaacctgccgtcattgtgctgccaaccggtgccggcaagagtctggtg
attgccgagctggcccggctggcccgtggccgggtgctggtgctggcgcacgtcaaagag
ctggtggcgcagaaccacagtaaatatcaggcctacgggctggaggcggatatctttgct
gccggacttcagcgcaaagagagtcagcgcaaagtggtgtttggcagcgtgcagtcagtg
gcgcgtaacctcgaccagttcgacagcgccttctcgctggtgattgtcgatgagtgtcac
cgcattggcgatgataaagagagtcagtatcagcagatctttaatcatctgcgtcagcac
aatccgcaactgcgtttactgggactgaccgctacaccgttccgtctgggtaaaggctgg
atttatcagttccactatcacggcatggtgcgtggcgatgaaaaatcgctgtttcgcgac
tgtatctatgaactgcccctgcgctacatgatcaagcatcagtttctggtgccgccggaa
cgactggatatgccggtggtgcagtatgacttcagccgtctcacggcacagtccaacggc
ctgttcagcgaagccgatctgaaccgtgaactgaagcagcagcagcgcgtgacgccccat
atcatccgccagatcgtggagttcgctgaagatcggctgggcgtgatgattttcgcctcg
acggtggagcatgcgcgtgaaatcctgcgactgctgccagaaaaaagcgcgctggtctcg
gccgaaacgccagccagagagcgcgatgccctgattctggcgtttaaggcgcagcagctg
aaattcctggtgaatgtggcggtgctgaccaccgggtttgatgcgccgcacgttgacctg
atcgcaatcctgcgcccgaccgagtcggtcagcctctatcagcagatcgtcggacgcggc
ctgcggctctcaccgggtaaaaccgactgcctgattctcgattacgcgggtaatccgcac
gatctctttacgcccgaagttggcgcccccaaaggggccagcgacaatcagccggttcag
gttttctgtcccgcctgcggtttcgccaacaccttctggggcaaggcgaccgaagatggc
atggtgatcgagcattttggccggcgctgtcagggcgtactggaagatgacgaaggtgag
cgcgaacagtgtgatttccgcttccggtttaaaagttgtcccgactgcggcgcagagaat
gatattgccgcccgacattgtcaccagtgcgacaaaattctggtcgatccggacgatatg
ctgaaagcggcgctgaaactgaaagacgcactggtgcttcgctgtggtggcatgacgctg
gaacagggccatgacgccaaaggggaatggctgaaggcgacctattttgatgaggaaggc
accagcgtcagcgaacgctttcgtctgcagacgccggcccagcgtaaggcgtttgaacag
ctctttatgcgtccccatcagcgcgcccccggcgtgccgctgggctggcagaccgccgct
gacgtcctggcactccagccgctgctacgtcatcccgattttgtcgtcgcacgggccaaa
ggccagttctggcagatccgcgagaaaatgttcgattatcagggccgctatcgccgcgcc
aatgagctgcgttaa
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