Pantoea eucalypti: EE896_09005
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Entry
EE896_09005 CDS
T06282
Symbol
pdeR
Name
(GenBank) cyclic di-GMP phosphodiesterase
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
pey
Pantoea eucalypti
Pathway
pey02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pey00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EE896_09005 (pdeR)
Enzymes [BR:
pey01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
EE896_09005 (pdeR)
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Paralog
GFIT
Motif
Pfam:
EAL
GGDEF
PdeR_N
PAS_9
PAS
PAS_4
PAS_10
Motif
Other DBs
NCBI-ProteinID:
QGF26973
LinkDB
All DBs
Position
complement(1942737..1944722)
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AA seq
661 aa
AA seq
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MTDEQGQTLLYTLFGTTSPHWRLTADSDALHFAEDESSQTNIALPLTPGQAAMIRAMPVI
TSSINLTMSLQGIDVPMHFVGRKVNQASWAGTASAWGDTSAVARDLTLGLSFAEQVVSEA
NSVIVILDQRGNIQRFNRLSEEYTGLNEHEVIGRNVFQLFMTRQEASQSRRNIAGFFRDG
NSYEVERWVKTKKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRVLANTD
TVTGLPNRNAIHQQISLALERAGHDETGVVYLDLDNFKKVNDAYGHMFGDQLLQAVSLAI
LSCLGKDQTLGRLGGDEFVVLAEHTSQAALEAMSSRILERLRQPFRIGLIEVYSGCSIGI
AFAPLHGEDRESLIRNADTAMYHAKENGRGKFCVFAAEMNQRVFEYLWLDTNLRKALELD
HLLVHYQPKIDSDGQVRSAEALVRWNSPERGMVSPADFIPYAEESGLIVPLGRWVMLNVL
QQIIVWRQQGIFLRVAVNVSARQLLDQSIYTDLKQALHEANITDCPIDIELTESCLIENE
TEALKLMKQFQELGAQVHLDDFGTGYSSLSQLARVPINAIKLDQSFIRDINKQPVSQSLV
RAIVAVAKALDLQVIAEGIETPDEEKFVLKSGVDGRQGYYYAKPMPAEQFGHWLAKHPAR
V
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgaacaagggcaaacgttgttgtacaccctttttggtacaaccagccctcat
tggcgtctgaccgcggacagcgatgcattgcattttgccgaagatgagtcgtcacaaact
aatatcgccctgccgctgacacccggccaggctgcaatgatccgcgcaatgcccgtcatc
acttcaagtatcaatctgaccatgtccctgcaaggcattgatgtgccaatgcattttgtc
ggacgtaaagtgaaccaggcctcctgggccggaactgcttctgcctggggagatacgtct
gcggtcgcccgtgacctgaccctgggcctttcattcgccgaacaggtggtttctgaagct
aattcagtgattgttatcctcgatcagcgtggcaatattcagcgttttaaccgcctgagt
gaagaatataccggtctgaatgaacatgaagttataggccgaaatgtctttcagttgttc
atgacccggcaggaagcctcacagtcgcggcgcaacattgcaggcttcttccgtgacggt
aactcgtacgaggtggagcgctgggttaaaaccaaaaagggccagcgactgtttctgttt
cgtaataagtttgttcacagcggcagcggcaaaaatgaaattttcctcatctgttctggt
acagacattaccgaggagcgacgtgcccaggaacgcctccgggtgctggcaaacaccgat
acggtcaccggtttacctaatcgcaacgccattcatcagcagattagcctggcgctggag
cgcgccgggcatgatgagaccggtgttgtctatctcgatctcgataatttcaaaaaagtg
aacgacgcctacggtcatatgttcggcgatcaattactgcaggcggtctctctcgcgatt
cttagctgtctgggtaaggaccagacgcttggccgtctgggtggcgatgagtttgtggtg
ctggctgaacacaccagccaggctgcgctggaggcgatgtcctcccgcattcttgagcgc
ctgcgacagcctttccgtatcggactgattgaagtttacagtggctgttccatcggtatc
gctttcgcaccgctgcatggcgaagatagagagagcctgattcgtaacgcggacaccgcg
atgtatcacgctaaagagaatggtcgcggcaagttctgtgtctttgccgccgagatgaac
cagcgggtctttgagtatctgtggctggacaccaacctgcgcaaggcgcttgaactcgat
catctgctggtacattaccagcctaagattgatagcgatggacaggttcgcagcgccgag
gcattagtacgctggaactcaccagagcgtggtatggtttcgcccgcagattttattccc
tatgccgaagagtcagggctgattgtgccgctgggacgctgggtaatgctcaacgtgctt
cagcagattatcgtctggcgtcagcagggtattttcctgcgcgtcgctgtcaatgtgtct
gcccgtcagctgctcgaccaaagtatctacaccgatctgaaacaggcactgcatgaggcg
aatatcactgattgtccgattgatattgagctcacagaaagttgtctgattgagaatgaa
actgaagcgctgaagctgatgaaacagtttcaggagctgggcgcacaggttcatctggat
gattttggcaccggttactcttcgctttctcagctcgcacgtgtgccgatcaatgcgatt
aagctcgatcaaagctttatccgcgacatcaataaacagccggtatcacaatcgctggtg
cgtgcaatcgtcgccgtcgcgaaggcgcttgatttgcaggtgattgcagaaggtattgag
acgccggatgaagagaagttcgtgcttaaaagtggtgttgatgggcgtcagggttactat
tacgcaaaaccaatgcccgcggaacaatttgggcattggctggctaagcatcctgcccgc
gtttaa
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