Pantoea eucalypti: EE896_11285
Help
Entry
EE896_11285 CDS
T06282
Name
(GenBank) type IV secretion protein Rhs
Organism
pey
Pantoea eucalypti
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
Motif
Other DBs
NCBI-ProteinID:
QGF27377
LinkDB
All DBs
Position
complement(2429485..2433522)
Genome browser
AA seq
1345 aa
AA seq
DB search
MATGNTIGKLQYAPAPQGHVAAGSANPPKKKSWWSSYGDWVHTGLDVLGAVPVVGAVADG
ANAAIYTAEGDYGNAALSAASAAANFVPGGGAAFKAGKLAAKAGKAVEAAKVGKGIAKEG
AELAEKAAVKAETTAAKVEAKAAKKEADEVISAKKAGSEKGGSDKGHAQKKTEPCKIPAR
PLPQVDMAIGSPVNPVLGIKLLFGPEDNDFSFPASVPLNWQRYYFSDEIGNGWLGQGWSL
PISQEVRKKAGLLVLMDEQGREIEFPYPEAGRQPQLHRYEQLYLSQPQPEEFCISAGDES
QHWHFSHKVESDRWLLSAISDRHGNRLTLRYDIRHLPVQIEDSAGRRFNINFSQFESDTG
SAFFRITSVSVCYPSDPLNAEILCRYDYSPQGDLIAVRNELNEVLREFRYRNHIMVAHRR
AGEMECFYHYDKYSPEGKVLAHRDSLGGEWRFEYGGQTTTVVDALGRVTRYDFDDNQELI
GYRDAMEGTIRIKRNVRGQMTQLTDQCGRFTRYRYDERGNCTAIIEPDGQTTRFDYHERW
NTPVRVTNMLGGSREFIYDTAGNLIRFSDEIGRITEYNHDDRGNLVRVRDAAAGVQTLCW
NQANFLISHTDCSGRTSTFDYDKYGWMKQQTDAAGNQTLFYNRWNGLPQRIVHADGGTES
FEFDRWRRLIARQDPLGQVTRWTLAADGLPLSRTDALGHSIGYEYDLARRLTALINENGA
RYTFRYDARDNQVEERGFDGCKTRYEYDDSGWLLVRIEEGDGSGQVIHSHYQRDPAGRLL
EKLVSRGGDATWQRTRYRYDALGRLTAGVNHGGRSELEWDDAGQLLAERTLVRGHRYELR
HSYDELGNRTHTILPDGRELKQLYYGSGHRVQVNLGNRIISESERDVMHREVRRTQGAIT
SEYLHDEMGRLISQRAGRGAQSAVAREYVWRRDGQLTQITDKYTGDYRYEYDALGRMTRA
RDEHFAFDPAHNLLSETQTQPLQDNWLRVYEDKRWTYDGFGNVTRKQSGRHTDQQFIWNA
EHQLTESVSIRNGTEQRTTYGYDAFGRRSWKRDAFGITRFIWEGNRLLSEVRGSRQHLWI
YEDDSFAPLAQISLQQGETEHEAQVNWYHNDVSGLPRELTGADGSVVWRAVYRAWGNTLR
IEQAAGENAEPVYQPLRYQGQYFDAETGLHYNRFRYYDPDAGRFVSQDPIGLAGGVNLYQ
YAPNPLSWVDPLGLNRAKCKPEAVELDPKTIRFSQSSVNGAADLTHSMRKNGWTGDPIDV
VRMSDGKLTTIDNTRVLAASRAGINVKARIHDGSSSLPNEFIERFTTKKGTPSSWEDAIQ
LRIGKQASKYKNGYPNGSNIIGSLD
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccggaaatacgattggtaaattacaatatgcgcctgcgccacaaggccatgtg
gcggcgggcagtgccaacccgccgaaaaagaaaagctggtggagcagttatggcgactgg
gtgcataccggtctggacgtgttaggcgcagttcctgttgtcggcgcggtagctgacggc
gcgaacgccgcgatttacaccgcagaaggggattatggtaacgctgcactttcagccgct
tcggcggcagctaactttgtacccggtggcggggcggcgtttaaagccggtaagctggca
gcaaaagcgggtaaagcggtagaagccgcgaaagtgggcaaaggcattgcaaaagaaggg
gctgaactggctgaaaaagcagccgtcaaagctgaaacgaccgctgctaaagtcgaagct
aaagccgctaaaaaagaagctgatgaagttatcagcgctaaaaaagcgggcagcgaaaag
ggaggcagtgacaaagggcatgcgcagaaaaagactgagccgtgcaaaattccggcaagg
cctctgccgcaggtggatatggcgattggtagtccggttaaccctgtactgggtatcaaa
ctgctgttcggccctgaagataatgatttctctttcccggcatcagttccccttaactgg
cagcgctactatttttctgatgaaatcggcaatggctggctgggacagggctggtcactg
cccatttcacaggaagtacgtaagaaagcgggtctgctggtcttaatggatgaacagggt
cgcgaaattgagttcccctatccggaagcgggccgccagcctcagcttcatcgctatgag
caactctacctctcgcagccgcagcctgaggaattttgtatttcggccggggatgaaagc
cagcactggcacttcagtcataaagttgaatctgaccgctggctgttgtctgccatcagc
gatcgtcatggcaaccggctgacgctccgttatgatatccggcatctgccggtgcagatt
gaagatagcgctggtcgtcgatttaatatcaacttctctcagtttgaatcggacacgggg
agtgcttttttccgtatcaccagcgtcagcgtctgttatccgtctgatcctctgaatgcc
gaaattctgtgccgctacgattattcacctcagggtgacctgattgccgtgcgtaatgag
ctcaacgaggtgctgcgtgaattccgttaccgtaaccatattatggtggcgcatcgtcgt
gcgggcgaaatggagtgtttttatcattacgataaatattcccctgaaggaaaagttctg
gcacatcgtgacagcctcggcggggaatggcgttttgagtatggcggtcagaccacaacg
gttgttgacgctctggggcgcgtgacacgttacgactttgacgataatcaggaacttatc
ggctatcgggatgcgatggaaggaaccattcgtatcaaacgtaatgtccgcggtcagatg
acacaacttactgatcagtgtggccgatttacacgctaccgctatgatgaacgcggcaac
tgtacggccatcattgagccagatggtcagactacacgttttgattatcacgaacgctgg
aacacgccggttcgtgtgaccaacatgctgggcggctcgcgtgaatttatctacgacaca
gcaggaaacttaatccgtttttcggatgagataggacgcattacagaatacaaccatgat
gaccgtggcaatctggtcagggtgcgtgatgctgcggcgggcgtacaaacgttatgctgg
aaccaggccaactttctgattagtcataccgactgttccggacgcacatcgacctttgac
tatgacaaatatggctggatgaagcagcagacggatgccgcaggcaaccagacgctgttt
tataaccgatggaatggcctgccccagcgtattgtgcatgccgatggtggaacggaaagc
tttgagtttgaccgctggagacgtctgattgcccggcaggatcctctggggcaggttacg
cgctggacgctggctgctgatggcttgccgctatcacgcactgatgcactcggccacagt
attggctacgaatacgatctggcccgtcgcctgaccgcactgattaatgagaacggtgcg
cgatatacattccgctacgacgcccgggataaccaggtcgaggagcgcgggtttgatggt
tgcaaaacgcgttatgaatatgatgacagtggctggctgctggttcgtattgaagaaggc
gatggcagcggtcaggtaatccactcgcactatcaacgggatcccgccggacgattgctg
gaaaagctggtgtcgcgcggtggagatgccacatggcaacgtacccgctatcgttacgat
gcgctgggacgcctcacagccggtgtcaatcacggcggacgctctgaactcgaatgggat
gatgccggacaactgctcgcagagcggacgctggttcggggtcaccgttatgaactgcgc
cacagctatgacgagctgggtaaccggacgcacactatcttaccggatgggcgggaactg
aagcagctctactacggcagcgggcatcgggtgcaggtcaacttgggtaaccgtattatc
agtgaaagcgaacgtgacgttatgcaccgtgaagtgcgccgtacccagggtgcaatcaca
agtgaatatcttcacgacgaaatgggacggctgataagccagcgtgcgggccgtggcgcg
cagtcagcggtggcacgcgagtatgtctggcgtcgcgatggccagctgacgcagattacg
gataaatacacgggtgattatcgttacgaatatgacgcgctgggacggatgacgcgggcg
cgtgatgagcatttcgcctttgatccggcgcacaatctgctgagtgaaactcagacgcag
ccattacaggataactggctcagggtttatgaagataaacgctggacctatgacggcttc
ggtaatgtgacgcgcaaacagagcggccgccacacagaccagcagtttatctggaacgct
gaacatcagctgaccgaatcggtgagcatccgcaacgggaccgagcagcgaaccacctac
ggctatgatgcgtttggacgtcgaagctggaaacgcgatgcttttggtatcacgcgcttt
atctgggaaggcaatcgcctgctgagtgaggtgagaggctcgcgccagcacctctggatt
tacgaggatgacagctttgctccgctggcgcagatcagtctgcagcagggcgagacggag
catgaagcgcaggttaactggtatcataacgacgtgtcaggtctgccacgagagctgact
ggtgctgatggcagtgtggtctggcgtgccgtctatcgtgcctggggcaatacgctgcgt
atagagcaggcagccggagagaatgcagagccggtttatcagccgctgcgctatcagggt
cagtatttcgatgcagaaacaggtttgcactataaccgctttcgctattatgatccggat
gcgggcaggtttgtgagccaggatccgatagggcttgctggtggggttaacctttatcag
tatgcgccgaatccgctgagttgggtggatccgctggggttgaatcgggcgaaatgtaaa
cccgaagctgttgagttagatcccaaaacgattcgttttagccaaagttctgtaaatggt
gctgctgatttaactcatagtatgagaaagaatgggtggactggagaccccattgatgtt
gttagaatgagcgatggaaaattaacaactattgataataccagagtacttgcagcatcc
agagcagggataaatgtcaaagcaagaattcatgatggttcatcatctttgccaaatgaa
tttattgaacgctttactactaaaaaaggaacgccttcttcctgggaagatgcaatacaa
ttacgaattggtaaacaagcttctaaatacaaaaatggttatcctaacgggtcaaatata
atagggtcattggactaa
DBGET
integrated database retrieval system
