Pantoea eucalypti: EE896_12890
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Entry
EE896_12890 CDS
T06282
Symbol
msbA
Name
(GenBank) lipid A ABC transporter ATP-binding protein/permease MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pey
Pantoea eucalypti
Pathway
pey02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pey00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
EE896_12890 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pey02000
]
EE896_12890 (msbA)
Enzymes [BR:
pey01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
EE896_12890 (msbA)
Transporters [BR:
pey02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
EE896_12890 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DEAD
Zeta_toxin
DUF87
AAA_25
AAA_22
RsgA_GTPase
AAA_16
APS_kinase
AAA_29
nSTAND3
AAA_30
AAA_18
Ploopntkinase3
AAA_24
MMR_HSR1
Activator-TraM
Motif
Other DBs
NCBI-ProteinID:
QGF27663
LinkDB
All DBs
Position
complement(2749652..2751400)
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AA seq
582 aa
AA seq
DB search
MHQDKDLSTWQTFRRLWPMIAPNKAGLIAASVALIINAAGDALMLSLLKPLLDDGFGKAD
RSVMLWLPLVVIGLMLVRGVTSYISSYCISWVSGNVVMNIRRRLFSHMMGMPVSFFDQQS
TGTLLSRITYDSEQVASSSSGALVTVVREGASIIGLFVMMFYYSWQLSLILIVLAPIVSF
AIRTVSKRFRTISKSMQNTMGQVTTSAEQMLKGHKEVLIFGGQEIESERFSRVSNRMRQQ
GMKLVSASSISDPIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKS
LTNVNAQFQRGMAACQTLFSILDSEQEVDNGTREMTRAKGDIEFRDVTFTYPGRDIPALR
NINLSLPAGKTVALVGRSGSGKSTMASLLTRFYDIQQGEILLDGHDLREYSLRSLRNQVA
LVSQNVHLFNDTIANNIAYARSEQYSRAEIEQAATMAHAMDFINKMDKGLDTVIGENGVL
LSGGQRQRIAIARALLRDCPILILDEATSALDTESERAIQSALDELQKNRTSLVIAHRLS
TIEKADEIVVIEDGQIVERGTHQVLLAERGAYAQLHKMQFGQ
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcatcaagataaagatctctctacgtggcagacgtttcgccgactctggccgatgatc
gcgcctaataaagcgggattaattgcggcttcagtcgccctgattatcaatgctgcgggc
gacgccttaatgctctcactgttgaaaccattactggatgatggttttggtaaagctgac
aggtcggtgatgctatggctgccgttagtggtcattggcctgatgctggtacgcggcgtg
accagttatatctccagctactgcatctcctgggtctcaggcaatgtcgtgatgaatatc
cgccgtcggctgttcagccatatgatgggaatgccggtttcattctttgaccagcagtcg
accggcaccctgttgtcacgcattacttacgattccgagcaggtcgcctcctcttcttcc
ggcgcgctggtgacggtggtgcgtgaaggtgcttccattattggcctgtttgttatgatg
ttctactacagctggcagctgtcgttgatcctgattgttctggcacccatcgtctcattt
gcgatccgtactgtttcaaagcgtttccgcactatcagcaaaagtatgcagaacaccatg
ggtcaggtgacaaccagcgctgagcagatgctgaaaggtcacaaagaagtgctgattttt
ggcggtcaggaaatcgaatcggagcgcttttcccgcgtcagtaaccgtatgcgtcagcag
ggaatgaagctggtatcagcatcctccatttcggatcccattattcagctcatcgcatcg
ctggcactggcgtttgtactttatgccgcgagcttcccaagcgtcatggatacgctgacc
gccgggacgattaccgtggtcttctcctcgatgattgccctgatgcgcccgcttaagtcg
ctgaccaacgttaatgcccagttccagcgtggcatggcggcctgtcagacgctgttctct
attctggacagtgagcaggaagtggacaatggcacacgcgaaatgacccgggcgaaaggc
gatatcgaattccgtgatgtgacctttacctatccgggccgtgatattccggcactgcgt
aatatcaatctgtcactgccagcaggaaaaacggtggcgctggtgggccgttcaggttct
ggtaagtcgacgatggcgagcctgctgacccgcttttatgacattcagcagggcgaaatc
ctgctggacggacatgacctgagagagtacagcctgcgttcgctgcgtaatcaggtcgcg
ctggtgtcgcagaatgtgcatctctttaacgacaccattgccaataacatcgcttatgcg
cggagtgagcaatacagccgtgcagagatcgagcaggcagccaccatggcgcatgccatg
gactttatcaataagatggataaaggcctggatacagtgattggcgagaatggcgtgctg
ttatctggcggtcagcgtcagcgtatcgctattgcccgcgcactgctgcgtgattgtccg
attctgatcctggatgaagcgacctctgcgctggatactgagtcagaacgcgccattcag
tctgcacttgatgagttgcagaagaaccgtacctcgctggtgattgcgcaccgcctctca
accattgagaaagcggatgaaatcgtggtcattgaagatggtcagattgtagaacgcggt
acgcatcaggtgttgctggcagaacgcggtgcctatgcacaactgcataagatgcaattc
ggccaatga
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