Pantoea eucalypti: EE896_13495
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Entry
EE896_13495 CDS
T06282
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pey
Pantoea eucalypti
Pathway
pey03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pey00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EE896_13495 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pey03019
]
EE896_13495 (rhlE)
Enzymes [BR:
pey01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EE896_13495 (rhlE)
Messenger RNA biogenesis [BR:
pey03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EE896_13495 (rhlE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
HI1480
DUF6256
Motif
Other DBs
NCBI-ProteinID:
QGF27779
LinkDB
All DBs
Position
complement(2895691..2897064)
Genome browser
AA seq
457 aa
AA seq
DB search
MSFDSLGLSADILRAVAEQGYSEPTPIQRQAIPVVLAGRDLLASAQTGTGKTAGFTLPLL
QKLSATATPIRGRRPVRALILTPTRELAAQVGENVSDYSKYLSLRSMVVFGGVSINPQMV
KLRGGVDILVATPGRLLDLAQQNAVDLSQVEVLVLDEADRMLDMGFIHDIRRVLARLPAK
RQNLLFSATFSDEIKGLAEKLLTNPEMIEVARRNTASEQVAQQVAFVDKKRKRELLSQLI
GEGNWQQVLVFTRTKHGANHLAEQLGKDGISAAAIHGNKSQGARTRALADFKSGGIRVLV
ATDIAARGLDIEELPHVVNYELPNVAEDYVHRIGRTGRAAATGVALSLVCVDEHKLLRDI
ERLLKREIPRLAVEGYEPDPSIKAEPIINGRQQQSRGGAGGGGRGRGQGGQGAGASRSSS
SGDKRPQARRQSQAAPQGDKPASRPRRPAAAKRTGNV
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgactctctcggcctgagtgccgatattttgcgcgcggtcgccgaacaaggc
tacagcgaacctacacctatccagcgccaggcaattcctgtggtgctggctggccgcgat
ctgctggcgagtgcccagaccggcaccggcaaaacggccggctttactttaccgctgtta
cagaaactctctgccactgccacgccaatccgcggtcgtcgcccggtgcgcgccctgatc
ctgaccccaacccgtgaactcgcggcgcaggtcggtgaaaacgtcagcgactacagcaag
tatctttcgctgcgttcgatggtggtgtttggtggtgtcagcatcaatccccagatggtc
aagctgcgtggcggcgttgatattctggtcgcaacaccaggccgcctgctggatctggcg
caacagaatgccgttgacctgtcacaggtcgaagttctggtgctggatgaagcggaccgc
atgctggatatgggctttatccatgatatccgtcgtgtgctggcgcgcctgccggcgaaa
cgtcagaacctgctgttctctgccaccttctctgatgagattaaaggtctggctgagaaa
ctgctgaccaatccggaaatgattgaagtggctcgccgcaataccgcctctgagcaggtt
gcgcagcaggtggctttcgttgataagaagcgcaagcgtgaactgttgtcgcagctgatt
ggcgaaggtaactggcagcaggtgctggtcttcacccgtaccaaacacggtgcgaaccac
cttgccgagcaactgggcaaagatggcatcagcgctgcagccattcatggcaacaagagc
cagggtgcacgtacccgtgcgctggccgactttaagtcaggcggtattcgcgtgctggtt
gcgaccgatatcgcggcccgtggcctggatattgaagagctgccacacgtcgtgaactac
gagctgcctaacgtcgccgaagattatgttcaccgtattggccgtacaggtcgtgcagcc
gcgaccggtgtcgcactgtcgctggtctgcgtcgatgagcataaactgctgcgtgatatt
gagcgtctgctgaagcgtgaaatcccgcgtctggccgttgaaggttatgaacccgatccg
agcatcaaagcggagccgatcattaatggtcgtcagcagcagtctcgcggcggtgcaggt
ggcggcggccggggtcgtggtcagggcggacagggtgcaggcgcatcgcgttcatcttca
tccggcgacaagcgtcctcaggcgcgtcgtcagagccaggccgcgcctcagggcgataag
cccgcgtcgcgtccacgtcgtccggcagccgcgaagcgtaccggtaacgtctga
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