Pantoea eucalypti: EE896_13705
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Entry
EE896_13705 CDS
T06282
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pey
Pantoea eucalypti
Pathway
pey03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pey00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EE896_13705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pey03000
]
EE896_13705
03400 DNA repair and recombination proteins [BR:
pey03400
]
EE896_13705
Enzymes [BR:
pey01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
EE896_13705
Transcription factors [BR:
pey03000
]
Prokaryotic type
Helix-turn-helix
AraC family
EE896_13705
DNA repair and recombination proteins [BR:
pey03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EE896_13705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
QGF27820
LinkDB
All DBs
Position
2937949..2939424
Genome browser
AA seq
491 aa
AA seq
DB search
MLDPDIAYQALTSRDTRFDGVFFVGVTSTGIYCRPICPVKAPMQKNCLFFSSAEAAEKAR
FRPCLRCRPELAPGNAPVDQPHRVAEQLIQRIEEGMLEEREGLEAIAAEFSLSLRQLRRI
VQHELGVSPLELKQTRRMLLAKQLLTETQLPVTEVAYASGFSSLRRFNDVFQARYRMTPS
ALRREDTGAKRAQPGDRVTLRLAYRPPYDWAAMLWFLQTHLMKEVEAVEDGCWRRTVALG
RFRGWVSVSHLPQKNALQVTLSTSLTPVLPLLLRRLRDLFDLDAQPQRIAACLAQDPLLA
PSLIAHPGLRVPGAFDAFELGVRAIIGQQVTVKAATTVSSRFAAAFGEPCETPFADLTRY
TALPERIAALTVDDVAPMGIVSAARSRAIIAFATACASGDLRLSAAQPPDEVIKKLVSLP
GIGPWTAHYIAMRALRWPDAFPKEDIAIRNNLGGMSSKEAEARSQSWRPWRSYAVMHIWE
SLAVAKVKKKP
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatcccgacattgcctatcaggcgctgacctcacgtgatacccgcttcgacggc
gttttctttgtgggcgtgacctcaaccggtatctattgccgcccaatttgcccggtaaaa
gcgccgatgcagaaaaactgtcttttcttcagcagcgccgaggcggcggagaaagcgcgt
tttcgcccctgcctgcgctgccggcctgagctggctcccggcaatgcgcctgtcgatcag
ccgcatcgcgtcgcggagcagctgattcagcgcattgaggaaggcatgctggaggagcgc
gaaggtctggaggcgattgccgctgagttcagtctcagcctgcgtcagctgcgccgtatc
gtgcaacatgaactcggtgtctcaccactggagctgaagcagacacggcgaatgctgttg
gccaagcagttgctgacagaaacgcaactgccggtcacggaggtcgcctacgccagtggc
ttcagcagtctgcgccgttttaatgatgttttccaggctcgctaccgcatgacgccaagc
gcgctgcgccgcgaggatacaggcgcgaagcgtgcgcagcccggcgaccgcgtgacgctg
cggctggcctatcgcccgccctacgactgggcggcgatgctctggtttttgcagacacac
ctgatgaaggaagttgaggcagtggaagatggctgctggcgacgcaccgtggcgctggga
cgttttcggggctgggtcagtgtgtcccatctgccgcagaagaacgcgctgcaggtgacg
ctctcaacctcactgacgccggttctgccgctgctgctgcgccgcctgcgcgatctgttt
gacctggacgcgcagccgcagcgtatcgccgcctgtctggctcaggacccgctgctggca
cccagcctgattgcacatcctggtctgcgtgtgccgggcgccttcgacgcttttgaactt
ggcgtgcgcgctattatcggccagcaggtgaccgtcaaagccgccaccacagtcagcagc
cgttttgccgccgcctttggcgagccctgtgaaacgccctttgccgacctgacccgttac
accgcgcttcctgaacgcatcgcagcgctgacggtggatgacgttgcgccgatgggcatc
gtcagcgccgcccgctcccgcgccatcatcgcctttgccaccgcctgcgccagcggcgat
ctgcgtctcagtgccgcgcagccgcctgatgaggtgataaaaaagctggtcagcctgccg
ggcattggtccctggaccgcgcactatatcgcgatgcgcgccctgcgctggccggatgcc
tttcccaaagaggatatcgccatccgtaataacctgggcggcatgtcatctaaagaagca
gaagcgcgctcgcaatcctggcgtccctggcgcagctatgcggtgatgcatatctgggag
agcctggcagtggcgaaggtgaagaaaaagccgtga
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