Pantoea eucalypti: EE896_15505
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Entry
EE896_15505 CDS
T06282
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pey
Pantoea eucalypti
Pathway
pey03030
DNA replication
pey03430
Mismatch repair
pey03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pey00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EE896_15505 (dnaE)
03430 Mismatch repair
EE896_15505 (dnaE)
03440 Homologous recombination
EE896_15505 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pey03032
]
EE896_15505 (dnaE)
03400 DNA repair and recombination proteins [BR:
pey03400
]
EE896_15505 (dnaE)
Enzymes [BR:
pey01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EE896_15505 (dnaE)
DNA replication proteins [BR:
pey03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EE896_15505 (dnaE)
DNA repair and recombination proteins [BR:
pey03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EE896_15505 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QGF28148
LinkDB
All DBs
Position
complement(3297396..3300878)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFIHLRVHSDYSMVDGLAKTGPLIKKAAALGMPAIAITDFTNLCGLVKFYGGAHSA
GIKPVIGADFNVASELMGDELTQLTVLASSNTGYQNLTLLISRAYQRGYGVDGPIIDRDW
LIELQEGLILLSGGRRGDVGRSLLRGNNALVSQCLSFYQQHFPDRYYLELIRTGRQDEES
YLHAAVELAIAEGIPVVATNEVCFINAEDFDAHEIRVAIHDGYTLDDPKRPRNYSPQQYM
RSEEEMCELFSDIPEALENSVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDYLVVKSREGL
EERLAFLFPDEAERAEKRPEYDERLEIELTVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDIDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGREAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPDPGMTLEKAFIAEPQ
LPAMYDADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEHGQFPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALKMINPRREKQGLEPIDIASIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDIQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSIFRDGAESMGIDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKVLPPDINSGLYPFHVNDAGEIVYGIGAIKG
VGEGPIEAIIDARNEGGYFRELFDLCARTDTKKINRRVMEKLIMSGAFDRLGPHRAALMS
SLSDALKAADQHAKAEAIGQADMFGVLAEEPEQVEKSYASVTPWPEQVQLDGERETLGLY
LTGHPINQYLKEIERYVGGVRLKDMHPTDRGKITVAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVNLYYQRADARAKLRFGAAWRISPSD
RLLNDLRSLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccccgttttatacatctgcgtgtccacagtgactattcgatggttgatggc
ctggcaaaaaccgggccgctaatcaagaaagcggctgcccttggcatgccggcgatagcg
attaccgacttcactaacctctgtggcctggtgaaattctacggtggcgcgcacagcgca
gggataaagccggtcattggtgccgatttcaacgtggccagtgagctgatgggggatgag
ctgacacagcttaccgtgctggcgtccagtaataccggataccagaacctgacgctgctg
atctcccgcgcctatcagcgcggttatggcgtggacggacccattatcgatcgcgactgg
ctgatcgaattgcaggaaggattaatactgttgtcgggtgggcgacgcggcgatgtaggt
cgtagcctgctgcgcggtaacaatgcgctggtgtcgcagtgcctgtcgttttaccagcaa
cattttcccgatcgctactacctggagctgatccgtactggccgacaggacgaagagagc
tatctgcatgcagccgttgaacttgcgattgcagagggaataccggtcgttgccaccaat
gaagtctgctttatcaatgcagaagatttcgatgcgcacgaaattcgcgttgccattcat
gacggctatacgctggatgatcccaagcgtccgcgcaactacagtcctcagcaatatatg
cgcagcgaagaggagatgtgcgagctgttctcggacatcccggaagcgctggagaacagc
gtagagattgctaagcgttgtaacgtgacggtgcgactgggcgaatatttcctgccacag
ttcccgaccggtgatatgactaccgaagattatctggtggtgaaatcccgcgaggggctg
gaagagcgcctggcgttcctgttcccggacgaagctgagcgcgcagaaaaacgtccggaa
tatgatgagcgtctggagattgagctcaccgttattaaccagatgggattccccggctac
ttcctgatcgtgatggagttcatccagtggtccaaggataacggcgtgccggtgggccca
ggccgtggctccggtgccggttcgctggtggcctatgcgctgaaaatcaccgatatcgat
ccgctggaatttgacctgctgttcgaacgtttcctgaacccggaacgcgtctcgatgccc
gacttcgacgtcgatttctgcatggagaagcgcgatcaggtcatcgaacacgtcgctgat
atgtacggacgtgaagcggtttcccagattatcaccttcggtaccatggcggcgaaagcg
gttatccgcgatgtgggccgcgtgctgggtcatccttacggctttgttgatcgcatttca
aaactgatcccgcccgatcccggcatgacgctggaaaaagcctttattgctgaaccgcag
cttcctgcgatgtatgacgcagatgaagaggtgaaggcgctgatcgatatggcgcgtaag
ctggaaggggtcacgcgaaacgccggtaaacatgcgggtggcgtggtcattgcgccaacg
aaaatcacggatttcgcgccgctttactgcgatgaacacgggcagttcccggtcactcag
ttcgataaaaatgatgtggaatatgccggcctggtgaagttcgacttcctgggtctgcgt
acgctgaccatcatcgactgggcgctgaagatgatcaacccgcgccgggagaagcagggg
ctggagccgatcgatatcgcctcaatcccgctggatgataagaaaagcttcgatatgctg
cagcgctcggaaaccacagcggtattccagcttgaatcgcgcggcatgaaagatctgatt
aagcgtctgaagcccgactgcttcgaagatatgatcgcactggtggcgctgttccgtcct
ggcccactgcagtccggcatggtagataactttatcgaccgtaagcatggccgtgaagcg
atctcttatcccgacattcagtggcagcacgaaagcctgaaaccggtgctggaaccgact
tacggcattatcctctatcaggaacaggtgatgcagatcgcccaggttctctccggttac
accctgggcggcgcagatatgctgcgacgcgccatgggtaaaaagaaacccgaggagatg
gccaaacagcgctccatattccgcgatggtgccgaaagcatgggcatcgacggcgaactg
tcgatgaagatcttcgatctggtagaaaaatttgcaggttatggctttaacaagtcacac
tctgcggcttacgcactggtctcctatcagaccctgtggctgaaagcgcactatccggcc
gagttcatggcggcggtgatgaccgccgatatggataacaccgagaaagtggtgggcctg
gttgatgagtgctggcggatggggctgaaagtcctgccgcccgatattaactcgggtctc
tatcccttccatgttaatgacgcgggcgagatcgtttacggtatcggcgcgatcaaaggc
gtgggtgaaggcccgattgaagcgattatcgacgcccgtaatgaaggtggctatttccgc
gaactgtttgatctctgtgcccgtactgacactaaaaagatcaaccgtcgggtgatggaa
aaactgattatgtccggggctttcgatcgccttggaccgcaccgcgccgccctgatgagt
tcactcagtgacgcgttaaaagccgccgatcaacacgcgaaagcggaggcgattggccag
gcagatatgtttggcgtgctggcggaggagccggagcaggttgagaaatcgtacgccagc
gtcacgccgtggcctgagcaggtgcagctggatggtgagcgggaaacgctggggctatat
cttaccggccaccctattaatcagtatctgaaagaaattgagcgttatgttggcggggtg
cgtctgaaagatatgcatcctaccgatcggggtaaaattactgtggcggctggtctggtg
atcgccgcgcgggtaatggtcaccaagcgcggcaaccgaattggtatctgtactctggac
gatcgctccggtcgtcttgaggtgatgttatttaccgatgcgttagataaataccagcag
ttgctggagaaagaccgaatcctgatcgtcagcggacaggtcagctttgatgacttcagt
ggcgggcttaaaatgaccgcgcgtgaagtcatggacatcgacgaagctcgcgaaaaatac
gcgcgcggacttgctatctcgctgacggacaggcaaattgatgaccagctattaaaccgg
ctccgtcagtccctggaacctcatcgttcagggactattccggtgaatctctactatcag
agagccgacgcgcgagcgaagctgcgctttggtgcagcgtggcgaatttcgcccagcgat
cgtttacttaacgatctgcgctcgttgattggatcggagcaggtggaactggagtttgac
tag
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