Pantoea eucalypti: EE896_15675
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Entry
EE896_15675 CDS
T06282
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pey
Pantoea eucalypti
Brite
KEGG Orthology (KO) [BR:
pey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pey03016
]
EE896_15675 (thpR)
Enzymes [BR:
pey01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
EE896_15675 (thpR)
Transfer RNA biogenesis [BR:
pey03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
EE896_15675 (thpR)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
QTMAN_N
Motif
Other DBs
NCBI-ProteinID:
QGF28181
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All DBs
Position
3340954..3341511
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AA seq
185 aa
AA seq
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MATQRLFFAISLPDEMQQQLVHWRADNFPAEAGQPVVAANLHLTLAFLGEVAPQTSQQLQ
TLASRIIQPGFDLDLDDAGHWPRPGVVWLGCQRAPRGLLQLASLLRAQAARHGCYQSPQP
FHPHITLLRHATQPVALPPRGFHWRFRVSTFSLFASEYSRGRTRYRALASWPLTSQDPHA
LLSRS
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacaacgcttattttttgccatcagcctgcctgacgagatgcagcagcagctg
gtgcactggcgggcagacaactttcctgccgaggcgggccagccagtggtcgcagcgaat
ctgcatctgacgctggcatttctgggtgaggtcgcgccgcaaacctcccagcaactgcaa
acgctggcttcccgcattatccagcccggttttgatctcgacctggatgatgccggacac
tggccacgtccgggcgtggtctggctgggttgccagcgcgcaccacggggtctgctgcag
ctcgccagcctgctccgtgcgcaggccgcccgacatggctgttaccagagtccgcagccg
tttcatccacatatcacgctgttacgccatgccactcagccggttgcgttaccgccacgc
ggctttcactggcgttttcgcgtctccacgttttccctgtttgcctctgaatattcccgg
ggccgcacccgctatcgcgctctggccagctggccattaacgtctcaggatccgcatgca
cttctctcccgctcttaa
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