Pantoea eucalypti: EE896_18415
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Entry
EE896_18415 CDS
T06282
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
pey
Pantoea eucalypti
Pathway
pey03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pey00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EE896_18415 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pey03019
]
EE896_18415 (rhlB)
Enzymes [BR:
pey01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EE896_18415 (rhlB)
Messenger RNA biogenesis [BR:
pey03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EE896_18415 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
ERCC3_RAD25_C
CCDC138_C
Motif
Other DBs
NCBI-ProteinID:
QGF28673
LinkDB
All DBs
Position
3948375..3949667
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AA seq
430 aa
AA seq
DB search
MSKTHLTEQKFSDFALHPKVVEALDSKGFQYCTPIQALALPFTLSGRDVAGQAQTGTGKT
MAFLTSTFHHLLSHPAAEGRQVNQPRALILAPTRELAVQIHADAEPLTASTGLKLGLAYG
GDGYDKQLKVLEQGVDILVATTGRLIDYAKQNHVNLGAIQVMVLDEADRMFDLGFIKDIR
WLFRRMPPATQRLSMLFSATLSYRVRELAFEHMNSAEYVEVEPEQKTGHRIQEELFYPSN
EEKMRLLQTLLEEEWPDRAIIFANTKHRCEDVWGHLAADGHRVGLLTGDVAQKKRLRILD
DFTKGDVDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEEYALNLPSIEEYIGHSIPVSKYSSEALLTDLPPPKRLQRSRSGNGPRRGGNNANRRGA
PRNNNRKRSG
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacacttaactgaacagaagttttccgacttcgccctgcacccaaaagtg
gtggaagcccttgatagtaaaggctttcaatactgcacgccgattcaggcgttagctctg
ccttttacgctttcagggcgtgatgttgcaggccaggcgcaaaccggtaccggcaaaacg
atggcgtttctgacgtcaacgtttcatcatcttctctctcatcctgcggcggaaggccgt
caggttaaccagccacgggcattaattcttgcgccgacgcgtgaacttgctgtgcagatt
catgcagatgccgaaccccttaccgcctcaaccggcctgaaactgggtctcgcctatggc
ggagacgggtatgacaaacagctgaaagtgcttgagcagggcgttgatattctggtggca
accaccggtcgcctgatcgactacgcgaaacagaatcacgttaatctcggtgctattcag
gttatggtgctggacgaagccgatcgcatgttcgatctcggctttattaaagatattcgc
tggctgttccgtcgcatgccgccggctacccaacgtctgagcatgctgttctcggccacc
ctttcttatcgtgtccgtgaactggcatttgagcacatgaacagtgctgaatatgtggaa
gtggaaccggaacaaaaaaccggccatcgcattcaggaagagcttttctatccgtctaac
gaagagaaaatgcgcctgctgcagaccctgctggaagaagagtggcccgatcgcgccatt
atttttgccaacaccaagcaccgctgtgaagatgtctggggccacctggctgctgatgga
caccgcgtcggcctgctgaccggcgacgttgctcagaagaagcgtctgcgtattctggat
gacttcaccaaaggcgatgtagatattctggtcgcaactgatgttgcagctcgcggcctg
cacatcccggcggtaacccacgtctttaactacgatctgccagacgactgtgaagattat
gttcaccgtattggccgtaccggtcgtgcgggcgccagcggacactctatcagcctggcc
tgtgaagagtacgcgctgaacctgccttcgattgaagagtacattggccatagcatcccg
gtcagcaagtacagcagtgaagcgttgttaactgatttaccgccgcctaagcgtctgcaa
cgcagtcgttccggcaacggcccgcgtcgcgggggaaataacgccaatcgtcgcggcgcg
cctcgcaacaacaaccgtaaacgttcaggttag
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