Pseudomonas eucalypticola: HWQ56_00415
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Entry
HWQ56_00415 CDS
T07251
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pez
Pseudomonas eucalypticola
Pathway
pez03030
DNA replication
pez03410
Base excision repair
pez03420
Nucleotide excision repair
pez03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HWQ56_00415 (polA)
03410 Base excision repair
HWQ56_00415 (polA)
03420 Nucleotide excision repair
HWQ56_00415 (polA)
03440 Homologous recombination
HWQ56_00415 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pez03032
]
HWQ56_00415 (polA)
03400 DNA repair and recombination proteins [BR:
pez03400
]
HWQ56_00415 (polA)
Enzymes [BR:
pez01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HWQ56_00415 (polA)
DNA replication proteins [BR:
pez03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HWQ56_00415 (polA)
DNA repair and recombination proteins [BR:
pez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HWQ56_00415 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HWQ56_00415 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QKZ02340
UniProt:
A0A7D5D3Z4
LinkDB
All DBs
Position
78254..81019
Genome browser
AA seq
921 aa
AA seq
DB search
MSKAPLVLVDGSSYLYRAFHALPPLTTSRGMPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDEMFADYKANRPSMPDDLRVQVEPLHASVRALGYPLLCVDNVEADDVIGTLAR
SSAAADRPVIISTGDKDMAQLVDGHVTLVNTMTGSVMDIEGVKEKFGVGPEHIIDYLALM
GDKVDNIPGVPGVGEKTAVGLLVGIGGGLKELYENLDKVPALPIRGAKNLPAKLEEHKDM
AFLSYQLATIKVDVPLEVEVEALMCGEPDREALVELYTELEFKSWIDEVQRDAKRAGQEV
VPEAAPVAAVETRYETILDQARFDHWLEKLAKAELFAFDTETTGLDAQKAQLVGLSFAVE
PHEAAYLPLTHSYMGAPAQLDRDTVLLALKPLLEDPAKAKVGQNAKYDINILANCAIGGD
LAQGITVRGVKFDTMLESYVLDSTATRHDMDSLSAKYLGHSTITFEQIAGKGAKQLTFDQ
IPLEQAGPYAAEDADVTLRLHQLFQAKLAAAPSLISVVDEIEMPLVPVLAKIERQGALVD
ADLLGVQSGELGDKLAELERQAYEIAGEEFNLGSPKQLGVILYDKLGMPVLNKTAKGQAS
TAEAVLAELAEQDFPLPKVLMQYRSLSKLKSTYTDRLPEQINPRTGRIHTSYHQAVAATG
RLSSSDPNLQNIPIRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLAKDEGLLHAF
QNNLDVHRATAAEVFGVELDQVTTDQRRSAKAINFGLIYGMSAFGLAKQIGVDNKQAREY
IDRYFARYPGVLAYMERTRAQAAEQGYVETLFGRRLYLADINAKNPALRKGAERTAINAP
MQGTAADIIKRAMVAVDGWLTESGIDARVILQVHDELVLEVREDLVEQVSQQIRPHMSSA
AELDVPLLVEVGVGNNWDEAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagctcctctcgtcctcgtggacggttcctcctacctgtaccgggcgtttcat
gcgctgccgccgctgaccacctcgcgggggatgccgaccggcgcggtgaagggcgtgttg
aacatgctcaaaagcctgcgcaaacagtaccccgacagccccttcgcggttgttttcgat
gccaagggcggtacgttccgcgacgagatgttcgccgattacaaggccaaccgtcccagc
atgcccgacgacctgcgcgtgcaggtagaaccgctgcacgccagcgtacgcgccctgggt
tacccgctgctgtgcgtggacaacgtcgaggctgacgatgtcatcggtaccctggcccgc
agcagtgccgcggcggaccgcccggtgatcatctccaccggtgacaaggacatggcccag
ctggtcgacggccacgttaccctggtgaacaccatgaccggcagtgtcatggacatcgaa
ggcgtgaaggagaagttcggcgtcgggcccgagcacatcatcgactacctggcgttgatg
ggcgacaaggtagacaacatccccggcgttcccggcgttggtgaaaagaccgccgtcggc
ctgctggtgggtatcggcggtggcctgaaggagttgtacgagaacctcgacaaggtcccg
gccttgccaattcgcggcgccaagaacctgcccgccaagctcgaagagcacaaggacatg
gcgttcctgtcgtaccaactggcgaccatcaaggtcgacgtgccgctggaggtggaagtc
gaggctctgatgtgcggtgagcctgaccgcgaagcgctggtcgagctgtacaccgaactg
gagttcaagagctggatcgatgaagtgcagcgcgacgccaagcgcgcagggcaggaagtg
gtgcccgaggcggcgccggtggccgccgtcgagacccgctacgaaaccatcctggaccag
gcgcggttcgaccattggctggagaagctggccaaggccgagctgttcgccttcgacacc
gagaccactggcctggatgcgcagaaagcgcaactggtaggcctgtcgttcgccgtcgag
ccccatgaagcggcctacctgccgctgacccattcgtacatgggcgcccctgcgcagttg
gatcgtgacaccgtgctgctggccctcaagccgttgctggaagacccggccaaggccaag
gtcggccagaacgccaagtacgacatcaacatcctggccaactgcgccatcggcggcgac
ctcgcccagggcatcaccgtgcgtggggtgaagttcgacaccatgctcgaatcctatgtg
ctggactccacggccacccgtcatgacatggacagcctgtcggccaaatacctgggccac
agcaccattaccttcgaacagatcgcaggcaagggcgccaagcagctcaccttcgaccag
attcccctggagcaggcaggcccttacgcggcggaagacgctgacgtcaccctgcgcctg
caccagttgttccaggccaaactggcagctgcgccaagcctgatcagcgtggtggatgag
atcgaaatgcccctggtgccggtgctggccaagatcgagcgccagggcgcactggtcgac
gctgacctgctgggcgtgcagagcggcgagctgggcgacaaactcgccgaactggagcgc
caggcgtacgaaatcgctggcgaggagttcaaccttggctcgcccaagcaactgggggtg
atcctctacgacaaactgggcatgccggttctcaacaagaccgccaagggccaggcatcc
accgccgaagccgtgctggccgaactggccgagcaagatttcccgctgcccaaggtgctg
atgcagtaccgctccctgagcaagctgaaaagtacctacaccgaccgtttgccggagcag
atcaacccccgcacgggccgcatccacacctcctaccaccaggcggtggcggccaccggg
cgcctgtcgtccagcgacccgaacctgcagaacattcccatccgtactgccgagggccgg
cgtatccgccaagccttcgtcgcccccaagggctacaaactgctggccgcggactattcg
cagatcgagttgcgcatcatggcccacctggccaaggatgaaggtttgctgcatgccttc
cagaacaacctcgacgtgcaccgcgccaccgccgccgaagtgttcggcgtggagcttgac
caggtcaccaccgaccagcgtcgcagcgccaaggccatcaacttcggcctcatctacggc
atgagcgcgttcggcctggccaaacagatcggcgtggacaacaagcaggcccgggaatac
atcgaccgctactttgcccgctatcctggcgtgctggcctatatggagcgcacccgcgcc
caggcggccgagcaagggtatgtcgaaacgctgttcggccgtcgcctgtacctggccgac
atcaacgccaagaacccggccctgcgcaagggcgccgaacgtactgcgatcaacgcgccc
atgcagggcacggcggccgatatcatcaagcgcgccatggtggcggtggacggctggctg
accgagtcgggcatcgacgcccgggtcatcctgcaggtacacgacgaactggtactggaa
gtgcgcgaagacctggtcgaacaggtcagccagcagatccgcccgcacatgagcagcgcg
gccgagctggatgtgccgctgctggtggaagtgggcgtgggcaacaactgggatgaggcg
cactga
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