Pseudomonas eucalypticola: HWQ56_00740
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Entry
HWQ56_00740 CDS
T07251
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
pez
Pseudomonas eucalypticola
Pathway
pez02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pez00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HWQ56_00740 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pez02044
]
HWQ56_00740 (tssC)
Secretion system [BR:
pez02044
]
Type VI secretion system
Imp/Vas secretion system core components
HWQ56_00740 (tssC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
TssC
TSP_NTD
Motif
Other DBs
NCBI-ProteinID:
QKZ02395
UniProt:
A0A7D5D4F5
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All DBs
Position
complement(152786..154288)
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AA seq
500 aa
AA seq
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MNDKQTATQLQSDLVEVDSLAPQASLLDSIISESRVARSETERTRTRDLIEELVAQVLEG
EVTPSKDLIAVLDARIAEIDAMLSEQMNEIMHAREFQQLEASWRGLKYQVDQTETSTQLK
IQLFNASKKDLVKDLKSASEFDQSALFKKIYEEEYGTFGGAPFGMLLGDYEFTRHPEDMY
LLEEISHVAAAAHAPFISAASPELFGWDSFTDMAGPRDLAKIFDTVEYAKWKSFRNSEDS
RYVGLTLPHVLGRLPYGPDTAPVEEFNFVENVDGRDHNKYLWMNAAYALGTRVTDAFSRY
GWCVAIRGVEGGGLVEGLPTHTFNTDDGEVALKCPTEIAITDRREKELSDLGFIPLVHCK
GTDYAAFFGTQSAQKQKQYNTDIANANARLSAQLQYIFATSRIAHYMKAIMRDKIGSFAS
RKDVELFLNKWLSGYVLLDDTASQEAKAKFPLREARAEVFEVPGKPGVYKAVTYLRPHYQ
LDELTASLRLVAELPQSSRG
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacaagcaaaccgcaacgcaactgcagagcgacctggttgaagtcgacagcctg
gcgccccaggcctcgttgctggacagcatcatttcggaaagccgcgtggcccgctcggag
accgagcgcactcgcacccgcgacttgatcgaagagctggtggcccaggtgctggaaggt
gaagtgacgccaagcaaggacctgatcgccgtgctggacgcgcgcatcgctgaaatcgat
gcaatgttgtccgagcagatgaacgagatcatgcacgctcgcgagttccagcagttggaa
gcttcatggcgtggcctgaagtaccaggtggaccagaccgagaccagcacgcagctgaag
atccagctgttcaatgcctcgaagaaagacctggtcaaggacctgaagtcggcgtcggaa
ttcgaccagagcgcgctgttcaagaagatctacgaagaggaatacggcactttcggtggc
gcgcccttcggcatgctgctgggtgactatgagttcacccgccaccccgaagacatgtac
ctgctggaagagatctcccatgtggccgcggcagcccacgccccgttcatttcggcagca
tcgccggaactgttcggttgggactcgttcaccgacatggcgggcccacgtgacctggcc
aagattttcgacacggtggaatacgccaagtggaagtcgttccgcaattccgaggattcg
cgctacgtcggcctgaccctgccccacgtgctgggccgcctgccgtatggccctgatacg
gcgccggtggaggagttcaacttcgtcgagaacgtcgatggccgcgaccacaacaagtac
ctgtggatgaacgcggcatacgcgctgggtacccgcgtcactgacgcgttctcgcgctac
ggctggtgcgtggcgatccgtggcgtggaagggggcggcctggtggaaggcctgccaacg
cacactttcaataccgatgacggtgaagtggcgctcaagtgccctactgaaatcgccatc
accgaccgccgcgagaaggagctgtcggacctgggcttcattcccctggtgcactgcaag
ggcaccgactatgccgcgttcttcggcacccagtcggcgcagaagcagaagcagtacaac
accgatatcgccaacgccaacgcgcgcctgtcggcacagctgcaatacatcttcgctacc
tcgcgtatcgcccactacatgaaggcgatcatgcgcgacaagatcggcagcttcgcctcg
cgcaaagacgtcgagctgttcctcaacaagtggttgtcgggctacgtcctgctggacgat
accgccagccaggaagcgaaggccaagttcccgctgcgcgaagcccgcgccgaggtgttc
gaagtgcctggcaagccgggtgtgtacaaggctgtgacctacctgcgcccgcattaccaa
ctcgatgaactgaccgcttcgctgcggctggtcgccgaactgccgcaatccagccgcggc
tga
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