KEGG   Pseudomonas eucalypticola: HWQ56_02725
Entry
HWQ56_02725       CDS       T07251                                 
Symbol
orn
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
pez  Pseudomonas eucalypticola
Pathway
pez03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pez00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    HWQ56_02725 (orn)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pez03019]
    HWQ56_02725 (orn)
   03009 Ribosome biogenesis [BR:pez03009]
    HWQ56_02725 (orn)
Messenger RNA biogenesis [BR:pez03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HWQ56_02725 (orn)
Ribosome biogenesis [BR:pez03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    HWQ56_02725 (orn)
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: QKZ02773
UniProt: A0A7D5D4S4
LinkDB
Position
596638..597180
AA seq 180 aa
MQNADNLIWIDLEMTGLDPDTDVIIEMATIVTDSNLNTLAEGPVIAIHHSDEVLARMDEW
NTRTHGNSGLTQRVRDSKVSMAEAEAQTIAFLEQWVPKGKSPICGNSICQDRRFLYRHMR
GLENYFHYRNLDVSTLKELAARWAPKVKDSFKKGSTHLALDDIRESIAELRHYREHFIKF
NT seq 543 nt   +upstreamnt  +downstreamnt
atgcaaaacgctgacaacctgatctggatcgacctggaaatgaccggcctggacccggac
accgacgtcatcatcgaaatggctactatcgtcaccgatagcaacctgaacaccctggcc
gaaggcccggtcattgccatccaccacagcgacgaagtgctggcgcggatggatgaatgg
aacacccgtacccacggcaattcgggtttgacccagcgtgtgcgtgacagcaaggtcagc
atggccgaggccgaagcccagaccatcgctttcctcgagcagtgggtgcccaagggcaag
tcgccgatttgcggcaacagcatctgccaggaccgccgtttcctgtaccgccacatgcgc
ggcctggaaaactacttccactaccgcaacttggacgtttccaccctcaaggaactggcc
gcgcgttgggcgccgaaggtcaaggacagcttcaagaagggcagcacccacctggcgctg
gacgacatccgcgagtccatcgccgagctgcgtcactaccgtgagcacttcatcaagttc
tga

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