Pseudomonas eucalypticola: HWQ56_06030
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Entry
HWQ56_06030 CDS
T07251
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pez
Pseudomonas eucalypticola
Pathway
pez03410
Base excision repair
pez03430
Mismatch repair
pez03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HWQ56_06030 (recJ)
03430 Mismatch repair
HWQ56_06030 (recJ)
03440 Homologous recombination
HWQ56_06030 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pez03400
]
HWQ56_06030 (recJ)
DNA repair and recombination proteins [BR:
pez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HWQ56_06030 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HWQ56_06030 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HWQ56_06030 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
QKZ03369
UniProt:
A0A7D5H3Z9
LinkDB
All DBs
Position
1308021..1309730
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AA seq
569 aa
AA seq
DB search
MRIEPRQLPATLPFLGDLPPLLTRLYAARGVQSEAELDKSLARLIPYQQLKGIDAAVELL
VDALAQRQRILIVGDFDADGATASSVGVLGLRLLGAAHVDYLVPNRFEYGYGLTPEIVAV
ALQRQPDLLVTVDNGISSVDGVAAAKAAGLKVLVTDHHLPGPELPAADAIVNPNQPGCEF
PSKSLAGVGVIFYVLMALRARLRSLGHYDSKPQPNIGELLDLVALGSVADVVPLDANNRI
LVHQGLERIRAGRARPGLKAILEVAKRDHRRITSTDLGFILGPRLNAAGRLDDMSLGIEC
LLSDDSALAQAMAAQLDELNQDRKSIEQGMQREALAQLKDLPLEDMPFGLCLFDADWHQG
VIGILASRLKERYHRPTIAFADAGEGMLKGSARSVPGFHIRDALDAVAARHPQLISKFGG
HAMAAGLSLPESNFPAFAQAFDEEVRRQLQEDDLTGRLLTDGSLAVEEFHLELARALRHA
GPWGQHFPEPLFHGVFQLAEQRVVGERHLKVVLKSECGSVKLDGIAFGIDRDVWPNPTVR
WVELAYKLDVNEFRGQETVQLLIAHMEPR
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgaaccgcgtcaactgcctgccaccctgccgtttctcggtgaccttccgccc
ttgctcacccgcttgtacgcggcgcggggggtgcagtcggaggccgagctggacaagagc
ctggcgcggctgatcccgtaccagcagctcaaaggcatcgacgcggccgtggagctgctg
gtggacgccctggcccagcgccagcgcatcctcatcgtcggcgacttcgatgccgatggt
gccaccgccagcagcgttggcgtgttgggcctgcgcttgctgggcgcggctcatgtcgac
tacctggtgcccaaccggttcgaatacggctatggcctgacgccggaaatcgtcgctgtg
gcgctgcagcgccaaccggacctgctggtgaccgtggacaacggaatttccagtgtcgac
ggcgtggccgccgccaaggccgcggggctcaaggtgctggtcaccgaccaccacttgcca
ggccccgaattgcccgccgccgatgccatcgtcaaccccaaccagcccggctgcgagttt
cccagcaagtcgctggccggtgtcggggtgattttctatgtgctgatggccctgcgcgca
cgcctgcgcagcctgggccattacgacagcaagccgcagcccaacatcggcgagctgctc
gacctggtggccctgggcagtgtcgccgacgtggtgccgctggacgccaacaatcgcatc
ctggtgcaccagggcctggagcgcattcgtgccggccgcgcccggccgggcctcaaggcg
attctggaggtagccaagcgcgaccaccggcgcatcacctccaccgacctgggcttcatc
ctcggcccgcgcctgaacgcagcggggcgcctggacgacatgagcctgggcatcgaatgc
ctgctcagcgacgacagcgccctggcccaggccatggccgcgcaactggacgaactgaac
caggaccgcaaatccatcgagcaagggatgcagcgggaggcgttggcccagctcaaggac
ttgccgctggaggacatgcccttcggcctgtgcctgttcgacgcggactggcaccagggg
gtgatcggcatcctcgcctcgcgcctcaaggaacgctaccaccggcccaccatcgccttt
gccgatgccggcgagggcatgctcaagggctcggcgcgttcggtccctggcttccacatc
cgcgatgcgctggacgccgtggcggcgcgccacccgcaactgatcagcaaattcggtggc
cacgccatggccgcaggcctgtcgttgcccgaaagcaatttccccgcctttgcccaggcc
ttcgacgaagaagtacgccgccagttgcaggaggacgacctcaccggccgcctgctgacc
gacggcagcctggccgtggaagagttccacctcgaattggcccgcgccctgcgtcacgcc
gggccctggggccagcacttccccgagccactgtttcacggcgtgttccagctggccgag
caacgagtcgtgggcgagcggcacctgaaggtggtgctcaagagcgaatgcggttccgtg
aagcttgatggcatagcctttggcatcgaccgcgacgtgtggcccaaccccaccgtgcgc
tgggtggaactggcctacaagctggacgtcaacgagttccgtggccaggaaaccgtgcag
ctgttgattgcgcacatggagccgcgttga
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