Pseudomonas eucalypticola: HWQ56_06510
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Entry
HWQ56_06510 CDS
T07251
Name
(GenBank) DEAD/DEAH box helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
pez
Pseudomonas eucalypticola
Brite
KEGG Orthology (KO) [BR:
pez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pez03009
]
HWQ56_06510
Enzymes [BR:
pez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HWQ56_06510
Ribosome biogenesis [BR:
pez03009
]
Prokaryotic type
rRNA helicases
HWQ56_06510
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QKZ03459
UniProt:
A0A7D5D574
LinkDB
All DBs
Position
1420466..1421803
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AA seq
445 aa
AA seq
DB search
MFSQFALHERLLKAVAELNFVEPTPVQVAAIPLAVQGRDLRVTAQTGSGKTAAFVLPILN
RLIGPAKVRVDIRAIILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRK
VPDILIGTPGRLLEHLNAGNLDLSKVEVMVLDEADRMLDMGFAEDVTRLSDECKHREQTL
LFSATTGGAGLRDMMGKVLKDPEHLLINNVSQLAEGTRQQIVTADHNVHKEQILNWLLAN
ETYQKAIVFTNTRAMADRIYGRLVAQDYKAFVLHGDKDQKDRKLAIDRLKQGGVKILVAT
DVAARGLDVDGLDLVVNFDMPRSGDEYVHRIGRTGRAGNEGLAISLICHGDWNLMSSIER
YLKQKFERRVIKEVKGTYAGPKKVKASGKAVGVKKKKTDAKKGDKKTAAKGPTKRKTVNK
PKAEQLVSADGMAPLKRRKPAPTAE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
gtgttttcccaattcgccttgcatgaacgcctgctcaaagccgtggccgagctgaacttt
gtcgagcctaccccggtgcaggtagcggccatcccgctggcagtgcaaggacgtgacctg
cgggtgacggcgcagaccggcagcggcaagaccgcggcattcgtgctgccgatcctcaac
cgcctgatcggcccggccaaggtgcgggtggacattcgcgccatcatcctgctgccaacc
cgcgagctggcccagcagaccctgaaggaagtggagcgtttctcccagttcaccttcatc
aagtccggcctgatcaccggcggtgaagacttcaaggtccaggccgccatgctgcgcaag
gtgccggacatcctgatcggcaccccgggccgcctgttggaacacctgaacgccggcaac
ctggacctgagcaaggtcgaggtcatggtgctggacgaagccgaccgcatgctggacatg
ggcttcgccgaagacgtcacgcgcctgagcgacgagtgcaagcaccgcgagcagaccctg
ctgttctccgccaccaccggcggcgccggcctgcgcgacatgatgggcaaagtgctgaaa
gaccccgagcacctgctgatcaacaacgtcagccagctggccgaaggcacccgccagcag
atcgtcaccgctgaccacaacgtgcacaaggaacagattctcaactggctgctggccaac
gagacgtatcagaaggccattgtcttcaccaacacccgtgccatggccgaccgcatctac
ggccgtctggtggcccaggactacaaagccttcgtgctgcacggcgacaaggaccagaag
gaccgcaagctggccatcgaccgcctgaagcaaggtggggtgaagattctggtggccacc
gacgttgccgctcgcggcctggacgtggatggcctggacctggtggtgaacttcgacatg
ccgcgcagcggcgacgagtacgtgcaccgcatcggccgtaccggccgtgccggtaacgaa
ggcctggccatctcgctgatctgccacggtgactggaacctgatgtccagcatcgagcgc
tacctgaagcagaagttcgagcgccgggtgatcaaggaagtcaaaggcacctatgcgggg
ccgaagaaggtcaaggcgtccggcaaagccgtgggcgtgaagaagaaaaagaccgacgcc
aagaaaggcgacaagaaaaccgccgccaagggcccaaccaagcgcaagacggtcaacaag
cccaaggccgagcaactggtgagcgccgacggcatggcgccgctcaagcgccgcaagcca
gcgcctaccgcggaataa
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