Pseudomonas eucalypticola: HWQ56_10005
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Entry
HWQ56_10005 CDS
T07251
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pez
Pseudomonas eucalypticola
Pathway
pez00071
Fatty acid degradation
pez00280
Valine, leucine and isoleucine degradation
pez00310
Lysine degradation
pez00362
Benzoate degradation
pez00380
Tryptophan metabolism
pez00410
beta-Alanine metabolism
pez00640
Propanoate metabolism
pez00650
Butanoate metabolism
pez00907
Pinene, camphor and geraniol degradation
pez00930
Caprolactam degradation
pez01100
Metabolic pathways
pez01110
Biosynthesis of secondary metabolites
pez01120
Microbial metabolism in diverse environments
pez01200
Carbon metabolism
pez01212
Fatty acid metabolism
Module
pez_M00087
beta-Oxidation
pez_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pez00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
HWQ56_10005 (fadB)
00650 Butanoate metabolism
HWQ56_10005 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
HWQ56_10005 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
HWQ56_10005 (fadB)
00310 Lysine degradation
HWQ56_10005 (fadB)
00380 Tryptophan metabolism
HWQ56_10005 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
HWQ56_10005 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
HWQ56_10005 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
HWQ56_10005 (fadB)
00930 Caprolactam degradation
HWQ56_10005 (fadB)
Enzymes [BR:
pez01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
HWQ56_10005 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
HWQ56_10005 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
HWQ56_10005 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
HWQ56_10005 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QKZ04097
UniProt:
A0A7D5D6H6
LinkDB
All DBs
Position
2166912..2169059
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLGELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVDNFKLPEAELVAGNLEANRIFSDFEDLGVPTVAAINGIALGGGLE
MCLAADYRVMAETAKVGLPEVKLGIYPGFGGTVRLPRIIGADNAIEWIASGKENRAEDAL
KAGAVDAVVAPEKLKDAALDLVKRAISSEFDYKAKRQPKLDKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGREKALEVEAAGFVKMAKTSAAQSLVGLFLNDQEL
KRKAKAYDELAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDINEKGIEQGLAEASKL
LGKRVEKGRLTPAKMAEALNAIRPTLSYGDFGHVDIVVEAVVENPKVKQAVLAEVEGQVK
DDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRVDKIMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMADGFPDRMKDDRRSAIDVLYEANRLGQKNGKGFYAYETDKRGKP
KKVADASVLEVLKPIVYEQRELTDDDILNWMMIPLCLETVRCLEDGIVATAAEADMGLVY
GIGFPPFRGGALRYIDSLGVANFVALADQYADLGPLYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaattg
aagttcgacctcaagggtgagtccgtcaacaagttcaaccgtctgaccctgggcgagctg
cgccaggccgtcgacaccatcaaggccgatgcctcgatcaagggcgtgattgtcagcagt
ggcaaggacgtcttcatcgtcggcgcggacatcaccgaatttgtcgacaatttcaagctg
cccgaggccgaactggtcgccggtaacctggaagccaaccgcattttcagcgatttcgaa
gacctgggcgtgcctaccgtggcggccatcaatggcatcgccctgggcggcggcctggaa
atgtgcctggcggctgactaccgcgtcatggccgagaccgccaaggtcggcctgcccgaa
gtcaagctgggcatctacccaggcttcggcggcaccgtgcgcctgccgcgcatcatcggt
gccgacaatgccatcgaatggatcgcctcgggcaaggaaaaccgtgccgaagacgccctc
aaggcgggtgcggtagatgccgtggtcgcgcctgagaagttgaaggacgccgccctggac
ctggtcaagcgcgccatcagtagcgaattcgactacaaggccaagcgccagcccaagctg
gacaagctcaagctcaacgccattgaacagatgatggccttcgaaaccgccaaaggcttc
gttgctggccaggccggcccgaactacccggccccggtcgaagccatcaagaccatccag
aaagccgccaacttcggccgcgaaaaagccctggaagtggaagccgccggtttcgtcaaa
atggccaagacctcggccgcgcagagcctggtggggctgttcctcaatgaccaggagctc
aagcgcaaggccaaggcctacgacgagctggcccatgacgtgaagcaggcggccgtgctg
ggcgccggcatcatgggcggcggcatcgcctaccagtcggcggtcaagggcacgccgatc
ctgatgaaggacatcaacgagaagggcatcgaacaaggcctggccgaagcctcgaagctg
ctgggcaagcgcgtggagaaaggtcgcctgaccccggcgaagatggccgaggcgctgaac
gccattcgccccaccctgtcgtacggcgatttcggccacgtcgacatcgtcgtcgaagcc
gtggtcgagaacccgaaggtcaagcaagccgtgctggctgaagtggaaggccaggtgaag
gacgacaccatcctggcgtccaacacctcgaccatttccatcagcctgctggccaaggcc
ctcaagcgcccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagcgaagtcgcggtggcgaccaccgtggcc
tatgccaagaaaatgggcaagaacccgatcgtggtcaacgactgcccgggcttcctggtc
aaccgcgttctgtttccatacttcggtggcttcgcccgcctggtcagtgccggcgtcgac
ttcgtgcgcgtggacaagatcatggagaaattcggctggcctatgggcccggcctacctg
atggacgtggtcggcatcgacaccggccaccacggccgcgacgtgatggccgacggcttc
ccggaccgcatgaaggatgaccgtcgttcggccatcgacgtgctgtacgaggccaaccgc
ctgggccagaagaacggcaagggcttctacgcctacgagaccgacaagcgcggcaagccg
aagaaagtcgccgacgcctcggtgctggaagtgctcaagccgatcgtctacgagcagcgc
gagctgaccgacgatgacatcctcaactggatgatgatccccctgtgcctggaaaccgtg
cgctgcctggaagacggcatcgtcgccactgcggccgaggccgacatgggcctggtctac
ggcatcggtttccctcccttccgtggcggtgcattgcgttacatcgattcgctgggcgtg
gccaatttcgtcgccctggcagaccagtacgccgacctgggcccgctgtaccaccccacc
gcgaagctgcgtgaaatggccaagaacggccagagcttcttcggttaa
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