Pseudomonas eucalypticola: HWQ56_17535
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Entry
HWQ56_17535 CDS
T07251
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pez
Pseudomonas eucalypticola
Brite
KEGG Orthology (KO) [BR:
pez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pez03032
]
HWQ56_17535
03400 DNA repair and recombination proteins [BR:
pez03400
]
HWQ56_17535
Enzymes [BR:
pez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HWQ56_17535
DNA replication proteins [BR:
pez03032
]
Prokaryotic type
DNA Topoisomerases
HWQ56_17535
DNA repair and recombination proteins [BR:
pez03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HWQ56_17535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QKZ05499
UniProt:
A0A7D5D7S2
LinkDB
All DBs
Position
3975294..3976343
Genome browser
AA seq
349 aa
AA seq
DB search
MADLAALSEQPELPPDLHYVDDSQPGIRREREGDHFVYFTAKGALIEDPAVIKRINALAV
PPAYTDVWICADPRGHLQATGRDARGRKQYRYHVRWREVRDENKYARMVAFGNALPKLRK
QLESHLALPGLDRNKVMATVIYLLDTTLIRVGNSQYARDNKSYGLTTLRNRHVAVKGSAI
EFHFRGKSGVEHRVSVKDRRVARIVKRCLELPGQHLFQYLDDQGERHTVTSSDVNAYLQD
MTGADFTAKDYRTWAGSALALAMLRELHWQPEPEAKRQIVEMVKAVARTLGNTPAVCRRC
YIHPAVLERYVLGELAKLPKPRKRKGLRLEEVALATFLQRLLDLQAAPA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccttgccgccctgtccgaacagcccgagttaccgccggacctgcactatgtg
gatgacagccagcccggcatccgccgcgaacgcgaaggcgaccacttcgtctatttcacc
gccaagggcgcgcttatcgaagaccccgcggtcatcaagcgcatcaacgccttggcggtg
ccgcccgcctacaccgacgtgtggatatgcgccgacccgcgcggccacctgcaggccacc
ggccgcgatgcccgcgggcgcaagcagtaccgctaccacgtgcgctggcgcgaggtgcgc
gacgaaaacaagtacgcgcgcatggtggcgttcggcaatgcgctgcccaagctgcgcaag
caactggaaagccacctggcactgcccggcctggaccgcaacaaggtcatggccacggtg
atctacctgttggacaccaccttgatccgcgtcggtaacagccaatatgcccgcgacaac
aagtcctacggcctgaccaccctgcgcaaccgccatgtggcggtgaagggcagcgccatc
gagtttcatttccgcggcaagagcggcgtggagcaccgggtgtcggtcaaagaccggcgc
gtggcgcggatcgtcaagcgctgcctggaattgccagggcagcatctgttccagtacctg
gacgaccagggtgagcgccacacggtcacctcatcggacgtcaatgcctacctgcaagac
atgaccggtgcggacttcaccgccaaggactaccgcacctgggccggcagcgcactggcc
ttggccatgctgcgcgaactgcactggcagccggaaccggaggccaaacgccagatcgtc
gaaatggtcaaggcagtggcgcgtaccttgggcaacaccccggccgtgtgccggcgctgc
tacattcacccggcggtgctggagcgctacgtgctgggggaactggcgaagctgcccaaa
ccacgcaagcgcaagggtttgcgcctggaagaggtggcgctggcgacatttctgcagcgc
ttgctggaccttcaggccgccccggcgtga
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