Pseudomonas eucalypticola: HWQ56_20105
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Entry
HWQ56_20105 CDS
T07251
Name
(GenBank) LysR family transcriptional regulator
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
pez
Pseudomonas eucalypticola
Brite
KEGG Orthology (KO) [BR:
pez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pez03000
]
HWQ56_20105
Transcription factors [BR:
pez03000
]
Prokaryotic type
Helix-turn-helix
LysR family
HWQ56_20105
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
QKZ05964
UniProt:
A0A7D5H8V5
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Position
4538107..4539318
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AA seq
403 aa
AA seq
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MLDELPNLLQVRAFVRVAEHGSISRASTLMYRAQSVVTRAIRDLETRLDVPLFERHASGM
LLTDQGKRVLARARRTLDELESVPALLGNVAGHAAEPLYLLNARRLELFIALCQTRHMQT
VASLYGLTQPAVSAALKVLEGGSGCLLFERSSRGLQPTRAASEILTPLRRALNELRHIDA
DLAALRGSLQGTVNVGALPLGRSRLLPAAIVALTAAHPGVRVATNESPFELLASELRAGD
VDFVFGALRPADFASDLHGEALLTEAMVLLARRDHPLQGHPLQPDELQNMRWVLPRAGSP
ARGLLNGQFAAWGIDPPLPVVESADLAIIRGLLLGSDMIAAVSAHQLGHEIDSGELHPLK
LQLPLTERPIGLTYRSAGLHAPAAQALMEQIRAAVAQRLPATE
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacgaactgcctaacctgctgcaggttcgcgccttcgtgcgagtggccgagcac
ggcagcatttcccgcgcctcaaccttgatgtaccgggcccagtcggtggtgacccgggcg
atccgcgacctggaaacccgcctcgacgtgccgctgttcgaacgccacgccagcggcatg
ctgttgaccgaccagggcaagcgggtgctggcccgtgcccgccgcaccctggacgaactg
gaaagcgtgccggcgctgctgggcaatgtcgccgggcatgccgccgagcccctgtacctg
ctcaatgcccggcgcctggaactgttcattgccctgtgccagacccgccacatgcagacg
gtggccagcctgtacggcctgacccagccggccgtgagcgcggcgctcaaggtgctggaa
ggtggcagcggctgcctgctgttcgagcgctcgtcgcgcggcctgcagcccacccgcgcg
gccagcgagattctcacgcccttgcgccgggccctcaacgaactgcgccacatcgatgcc
gacctcgcggccctgcgcggctccttgcaaggcaccgtcaacgtcggcgccctgcccctg
ggccgcagccgcctgttgcccgccgctatcgttgcgctgaccgcggcccacccaggggtg
cgggtagcgaccaacgagagcccgttcgagctgctggcctcggaactgcgtgccggtgat
gtggatttcgtcttcggcgccctgcgcccggccgacttcgccagtgacctgcatggcgag
gcgctgttgaccgaagcgatggtgctgctggcccgacgcgaccaccccttgcaagggcat
cccctgcaaccggacgagctgcagaacatgcgctgggtgctgccccgcgcgggcagcccg
gcccgcggcttgctgaacggtcagttcgccgcgtggggcatcgacccgcccctgccggtg
gtggaaagcgctgacctggcgatcattcgcgggttgctgctgggttcggacatgatcgcc
gccgtatcggcccaccaattgggccacgagatcgacagcggcgagctgcaccccctgaaa
ctgcaactgcccctcaccgaacgccccatcggcctgacctaccgcagcgccgggctgcat
gcgcccgcggcccaggcgctgatggagcagattcgcgcggcggtggctcagcgcttgccg
gccaccgagtag
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