Pseudomonas eucalypticola: HWQ56_20305
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Entry
HWQ56_20305 CDS
T07251
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pez
Pseudomonas eucalypticola
Brite
KEGG Orthology (KO) [BR:
pez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pez03000
]
HWQ56_20305
Transcription factors [BR:
pez03000
]
Prokaryotic type
Helix-turn-helix
Other families
HWQ56_20305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_30
PAS_4
HTH_7
HTH_23
AAA_22
AAA_2
HTH_11
HTH_20
HTH_22
Mg_chelatase
AAA_3
Phage_CP76
HTH_IclR
HTH_24
HTH_29
HTH_17
HTH_AsnC-type
HTH_10
HTH_3
HTH_psq
nSTAND6
HTH_26
AAA
HTH_28
HTH_Tnp_ISL3
HTH_Tnp_1
DUF2089
TetR_N
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
QKZ06000
UniProt:
A0A7D5D971
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Position
4577331..4579133
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AA seq
600 aa
AA seq
DB search
MFTPSATLDHEAMLQDSWARCRAFGLHHGCAAHFDPWTGERLQRWLARHAHLVATACREV
LPYYENILGNSSCLIRLADGQGRLLKRWGEQRLAEPPGCAGFEPGACWAERHVGTNAIGT
ALACGQAVHIEHDEHFLKANRFMSGSAAPIFDEQRCIVGVLDVSSDSYLPPSHTLGMVRM
MSQSVENRLIRDACAERHALLTFNTGPSNLDSPWAGLLALDAHGRVVAANRRADSLLAQA
LPGTSVERLFKQTLAALLDHGNGATFTLVAAGRNRFQCRLQLPAQGLPAGIATGSPALPA
TALDPAVAKALKVGKRLLDKDVGLLICGETGAGKEWLVRALHQASERHRCPLVAVNCAAI
PMELVESELFGYERGAFTGARATGNIGLVRKAHTGILLLDEIADMPLATQARLLRVLQER
AIQPLGAGDPVPVDIRVICATHQDLRQRVNSGHFRQDLYYRIAGATLNMPPLRQRSDKLE
LIQALLAPLHTPGEPQRPLSPAALKVLLRHPWPGNIRQLQSVLTVAHALAEGPHIEVCDL
PESFLDELQELPAALSASAATLDLGELLRDSDGNISQLARRLGVSRNTLYKRLRAHKTER
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgttcacccctagcgccaccctcgatcacgaggccatgctgcaggactcctgggctcgc
tgccgcgcgttcgggctgcaccacggctgtgccgcgcacttcgacccctggaccggcgaa
cgcctgcaacgctggctcgcccgccacgcccacctggtggccacggcctgccgggaagtg
ctgccctattacgaaaacattcttggcaactccagctgcctgatccgcctggccgacggc
caggggcgcctgctcaagcgctggggcgaacaacgcctggccgagccgccaggctgcgcc
ggtttcgagccaggggcgtgctgggcggagcggcatgtcggcaccaatgccatcggcacg
gcgttggcctgcggccaggccgtgcacatcgagcatgacgagcactttctcaaggccaac
cgcttcatgtccggttccgcggcccccatcttcgatgagcaacggtgcatcgtcggggtg
ctggacgtgtccagcgacagctacctgccgccgtcgcataccctgggcatggtccgcatg
atgagccagagcgtagaaaaccgcctgatccgcgatgcctgtgccgaacgccatgcactg
ctgaccttcaacaccgggccgagcaacctggacagcccgtgggccgggctcctggccttg
gacgcccacggtcgcgtcgtcgccgccaaccgccgggccgacagcctgttggcgcaagcc
ttgcccggtacgagcgtggaacggctgttcaagcaaacgctggcggcgttgctggaccat
ggcaatggcgccaccttcaccctggtggcagccgggcgcaatcgtttccagtgcaggctg
caacttccagcccagggcctgccggccggtatcgccacgggtagccctgccctgcccgcc
accgccctggaccccgcggtggccaaggcgctcaaggtcgggaagcgcctgctcgacaaa
gacgtagggctgttgatctgcggcgagaccggggcgggcaaagagtggctggtgcgcgcg
ctgcaccaggccagcgagcgccaccgctgcccgctggtggcggtcaattgcgccgccatc
cccatggagctggtggagtcggagctgttcggctacgaacgcggggcgttcaccggcgct
cgggccactggcaatatcggcctggttcgcaaggcgcacacaggcatactgctactggac
gaaatcgccgacatgccactggccacccaggcgcgtctgctgcgcgtactgcaggaacgc
gccatccagcccctgggggccggcgacccggtaccggtggatatccgcgtgatctgcgcc
acccaccaggacctgcgccagcgcgtcaatagcgggcactttcgccaggacctctattac
cgtatcgccggggcaacgctgaacatgccaccgttgcgccaacgcagcgacaagctggaa
ctgatccaggccttgctggcgccgttgcacaccccaggcgaaccgcaacgcccgctcagc
cccgcggcgttgaaagtactgctcaggcacccctggccgggcaatattcgccaattgcag
tcggtcttgacggtcgcacacgccctggccgaaggcccgcacatagaggtgtgcgacctg
cctgaatccttcctcgatgaactgcaggagttgcccgccgccctgagcgcttcggcggcg
acgcttgacctgggcgagttgctgcgtgatagcgacggcaacatttcacagctagcccgg
cgcctgggggtcagccgcaacacgctctacaagcgcttgcgggcccacaagaccgagcga
tga
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