Pseudomonas eucalypticola: HWQ56_21585
Help
Entry
HWQ56_21585 CDS
T07251
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pez
Pseudomonas eucalypticola
Pathway
pez03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pez00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HWQ56_21585 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pez03019
]
HWQ56_21585 (recQ)
03400 DNA repair and recombination proteins [BR:
pez03400
]
HWQ56_21585 (recQ)
Enzymes [BR:
pez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HWQ56_21585 (recQ)
Messenger RNA biogenesis [BR:
pez03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HWQ56_21585 (recQ)
DNA repair and recombination proteins [BR:
pez03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HWQ56_21585 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
HTH_40
ResIII
Sigma70_r4_2
HTH_23
HTH_29
GerE
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QKZ06226
UniProt:
A0A7D5HIL3
LinkDB
All DBs
Position
complement(4852057..4854198)
Genome browser
AA seq
713 aa
AA seq
DB search
MLEQAQRVLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLRPGLA
VVVSPLIALMDDQVATLEELGVAAASLNSTLSAEQQRDLAARIRRGEVKMLYLAPERLVQ
PRMLDFLRNLDIALFAIDEAHCVSQWGHDFRPEYLQLGQLAEQFPHVPRIALTATADKRT
REEIVTRLHLQDAERFLSSFDRPNIFYRIVPKENPRKQLMTFLAERRSDAGIVYCLSRKK
VDETAAFLCEQGFPALSYHAGLPADVRAQNQKRFLNEEGLIMVATIAFGMGIDKPNVRFV
AHMDLPKSLEAYYQETGRGGRDGLPADAWMAYGLQDVLMLKQMLQNSEGDERHKRVEQHK
LDAMLALCEETRCRRQALLAYFDEDMPKPCGHCDNCIDGVQTWDATEPARQALSAIFRTG
QRYGVGHLVDVLLGKDTEKVRNFGHEKLSVFGVGKARGEHEWRSLFRQLVARGLADVDLD
GYGGLRLSDTCRPLLRGEVTLLLRLEPKPQKGAGTTRSGSGSPASQLVRAEERDQWEALR
TLRRKLAEEHSVPPYVIFPDSTLLEMLRSQPGSMAEMAQVSGVGARKLDRYGEAFLAVLN
GGAEEAPRAVADIRHELISLARAGMTPAQIAGQLQCSEKNVYTLLAEAIGQQQLSLEQAL
DLPEDLMGEVQDAFLDGEGELPPVTDVAPLFAGRVPEGVLYCVRAALQSEFEM
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaacaggctcaacgcgtccttaaggacatcttcggctacgacagttttcggggt
cgccagggtgccattatcgaacgcgtggccagcggcggcgatgccctggtgctgatgccc
accggcggcggcaagtccctgtgcttccaggtgcccgcgctgctgcgcccgggcctggcg
gtggtggtctcgcccctcatcgcgctgatggacgaccaggtggccaccctggaggaactg
ggcgtggccgcggcctcgctgaactccaccctcagcgccgagcagcagcgcgacctggcc
gcgcgcattcgccgcggcgaagtgaagatgctctacctggcccccgagcgactggtgcag
ccgcgcatgctcgacttcctgcgcaacctggacatcgccctgttcgccatcgacgaagcc
cactgcgtgtcacagtggggccatgacttccgccccgaatacctgcaactgggccagctg
gccgagcagtttccccatgtgccgcgcattgccctgacggccaccgccgacaagcgtacc
cgcgaagaaatcgtcacccgcctgcacttgcaggacgccgagcgcttcctgtccagcttc
gaccggccgaacatcttctaccgcatcgtgcccaaggaaaacccgcgcaagcaactgatg
accttcctggccgagcggcgcagcgacgcaggcatcgtctattgcctgtcgcgcaagaag
gtcgatgaaaccgcggcgttcctgtgtgaacagggcttcccggcgctgtcctaccacgct
ggcctgccggccgacgtacgggcccagaaccagaagcgcttcctcaacgaagaaggcctg
atcatggtcgccaccattgccttcggcatgggtatcgacaagcccaacgtgcgtttcgtg
gcccacatggacctgcccaagtcgctggaagcctattaccaggaaaccggccgtggcggg
cgcgacggtttaccggccgatgcctggatggcctacggtctgcaggacgtgctgatgctc
aagcaaatgctgcagaactccgagggcgacgagcgccacaagcgcgtggagcagcacaag
ctcgatgccatgctggccctgtgcgaggaaacccgctgccgccgccaggcgctgctggcc
tatttcgatgaggacatgcccaagccctgcgggcattgcgataactgcatcgacggcgtg
cagacctgggacgccaccgagccggcgcgccaagcgctgtccgccattttccgcacgggg
cagcgttatggcgtggggcacctggtcgatgtgctactgggcaaggacaccgaaaaggtc
cgcaactttggccacgagaaactttcagtgtttggcgtgggcaaggcccgcggcgagcac
gaatggcgttcgctgttccgccaactggtggcgcgtggcctggccgacgtcgacctcgac
ggctacggcggcctgcgcctgagcgacacgtgccggccactgctgcgcggggaagtcacc
ctgctgttgcgcctggagcccaagccacagaaaggggcgggcaccacgcgcagcggctcc
ggcagccctgccagccaactggtacgtgccgaagagcgtgaccagtgggaagccctgcgt
accctgcggcgcaaactggccgaagagcacagcgtgccgccgtatgtcatcttccctgac
tccaccttgctggaaatgctgcgcagccagccaggcagcatggcggaaatggcccaggtc
agcggcgtgggcgctcgcaagctggaccgctacggcgaggcgttcctggccgtcctcaac
ggcggggcggaggaagcaccccgggccgtggccgacattcgccatgagctcatcagcctg
gcgcgcgccggcatgacccccgcgcagatcgctggccagttgcaatgcagcgagaaaaac
gtctacaccctgttggccgaggccatcgggcagcagcaactgtcgcttgagcaggcgctc
gatctgcccgaagacctgatgggagaggtgcaggacgcgtttctggatggtgaaggcgag
ctgccgcccgtgaccgacgtggcgccgctgtttgccggccgggtaccggaaggcgtgctg
tactgcgtcagggcggcgttgcagtccgaattcgaaatgtag
DBGET
integrated database retrieval system
