Pseudomonas eucalypticola: HWQ56_22005
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Entry
HWQ56_22005 CDS
T07251
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pez
Pseudomonas eucalypticola
Brite
KEGG Orthology (KO) [BR:
pez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pez03016
]
HWQ56_22005 (truD)
Enzymes [BR:
pez01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HWQ56_22005 (truD)
Transfer RNA biogenesis [BR:
pez03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HWQ56_22005 (truD)
Prokaryotic type
HWQ56_22005 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QKZ06306
UniProt:
A0A7D5HIQ8
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All DBs
Position
complement(4946936..4947994)
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AA seq
352 aa
AA seq
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MTEFELLGPCAAGPALGRAVLKATAEDFQVDEVLDIPLAGEGEHLWLWVEKRNLNTEEAA
RRLAKAAGVPLRTVSYAGLKDRQALTRQWFSLHLPGKADPDLRAAENETLSILKVARHKR
KLQRGAHAANGFTLRLTALQADREALDARLKQLSQTGVPNYFGTQRFGFQGGNVHDARQW
AERQALPEQRNVRSRLLSTARSYLFNQVLAARVADGTWNQAQVGDLLAFTDSRSFFPAGE
AECSDPRLAVLDLHPTGPMWGEGDSPAAGAIHALEQNVGAALAPLGQWLAKAGMAHERRI
LRLPIGGLAWHYPEPDILQLEFVLPAGCFATVVVRELVDLLPAGHTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgactgaattcgaattgctgggcccctgcgccgccgggcctgccctgggccgtgccgtc
ctgaaagccaccgccgaagatttccaggtcgacgaggtgctggatattcccctggccggg
gagggcgagcacctctggctgtgggtggaaaagcgcaacctcaacaccgaggaagcggcc
cggcgcctggccaaggccgctggcgtgccgctgcgcaccgtcagctacgccggcttgaag
gaccgccaggcgctgacccggcagtggttcagcctgcacctgccgggcaaggccgaccct
gacttgcgtgctgccgaaaacgagaccttgagcatcctcaaggtggcccggcacaagcgc
aagctgcagcgcggcgctcacgctgccaatggcttcaccctgcgcctgaccgcgctgcag
gccgaccgcgaggcgctggacgccaggctgaagcaattgagccagactggcgtaccgaat
tacttcggtacccagcgcttcggtttccaaggtggcaacgtccatgatgctcggcagtgg
gccgagcgccaggccctgcccgagcagcgcaacgtgcgctcgcggttgctgtccacggcg
cgcagctacctgttcaaccaggtgctggcggcaagggtggccgatggcacgtggaaccag
gcccaggtcggcgacctgctggcgttcaccgacagccgcagcttcttcccggccggtgag
gccgagtgcagcgacccgcgcctggccgttctcgacctgcaccctaccggcccgatgtgg
ggcgaaggtgactcgccggctgctggcgccatccatgcattggaacagaatgtcggtgca
gcgctggcgccgcttggtcaatggctggcaaaagcgggcatggcgcacgaacgacgcatc
ctgcggctgcccatcggcggtttggcgtggcattatccagagcctgacattctgcaattg
gaattcgtcctgccggccggatgctttgccaccgtcgtggtgcgcgagctcgtcgatctg
ctgcctgcagggcacacggacagcccatgcgtattctga
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