KEGG   Pseudomonas eucalypticola: HWQ56_25205
Entry
HWQ56_25205       CDS       T07251                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
pez  Pseudomonas eucalypticola
Pathway
pez03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pez00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HWQ56_25205
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pez03019]
    HWQ56_25205
Enzymes [BR:pez01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     HWQ56_25205
Messenger RNA biogenesis [BR:pez03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     HWQ56_25205
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 Cas3-like_C_2
Other DBs
NCBI-ProteinID: QKZ06893
UniProt: A0A7D5DA24
LinkDB
Position
complement(5638804..5640141)
AA seq 445 aa
MTFATLGLIEPLLRALETLGYQTPTPVQAQAIPAVLAGRDLMAAAQTGTGKTAGFALPML
QRLTMEGPKVASNCVRALVLVPTRELAEQVHASIREYGEHVPLSTYAVYGGVSINPQMMK
LRKGIDLLVATPGRLLDLYRQNAVKFNQLETLVLDEADRMLDLGFAEELRDIYAALPKKR
QTLLFSATFSDDIRLLAGQMLNDPLSIEVSPRNVAAATVKQWIVTVDKKRKPELFIHLMK
RLKWKQTLVFAKTRNGVDALVERLQGLGINADGIHGDKPQATRQRALDRFKANEVQILVA
TDVAARGLDIDDLPTVVNFDLPIVAEDYVHRIGRTGRAGQTGEAISLVCADEVQLLSAIE
VLTRQTLKRQEESGFEPDHRVPETNASGEVLKKPKKPKKPKVSGGKRTLGKWMDSGDTPT
ENVAPAVKPVRKVPAFNTGPRKRKP
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgacattcgccacccttggcctgattgaacccctgttgcgcgccctggaaacccttggc
taccagaccccgacgccggtacaggcccaggccattccagcggtgctggccggccgcgac
ctgatggccgccgcccagaccggcaccggcaagacggccggcttcgccctgcccatgctg
cagcgcctgaccatggaaggcccgaaagtggccagcaactgcgtgcgcgcgctggtactg
gtgccgacccgggaactggcagaacaggtgcacgccagcatccgtgagtacggtgagcat
gtgccgctgagcacctatgcggtgtacggtggcgtaagcatcaacccgcagatgatgaag
ttgcgcaagggcatcgacctgctggtggccaccccgggccgcctgctggacctctaccgc
cagaacgcggtgaaattcaaccagctggaaaccctggtgttggacgaggccgaccgcatg
cttgacctcggtttcgccgaagaactgcgtgatatctacgccgcattgccgaaaaagcgc
cagacgctgctgttttcggccacgttctccgacgacatccgcctgctggccgggcagatg
ctcaacgacccgctgagcatcgaagtcagcccgcgcaacgtagcggctgccactgtgaag
cagtggatcgtcacggtggacaagaagcgcaagccggagctgttcatccacctgatgaag
cgcttgaagtggaagcagaccctggtcttcgccaagacccgcaacggtgtcgacgccttg
gtcgagcgcctgcagggcctgggcatcaacgccgacggcatccacggcgacaagccccag
gccacgcgccagcgcgccctggaccgcttcaaggccaatgaagtgcagatcctggtggcc
accgacgtggcggcccgcggcctggacatcgacgacctgcccaccgtggtcaacttcgac
ctgcccatcgtcgccgaagactacgtgcaccgcatcggccgcacgggccgggcgggccag
acgggcgaggcgatttcgctggtgtgcgccgacgaagtgcaattgctgtcggctatcgaa
gtgctgacccgccagaccctcaagcgccaggaagaatcgggtttcgaacccgaccaccgg
gtcccggaaaccaatgccagcggcgaagtgctgaaaaaaccgaaaaagccgaagaaacct
aaggtcagcggtggcaagcgcaccttgggcaaatggatggacagcggcgatacgcccacc
gaaaacgttgccccggccgtcaagcccgtgcgcaaggttccggccttcaacaccggccca
cgcaagcgcaagccttaa

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