Pseudomonas eucalypticola: HWQ56_27340
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Entry
HWQ56_27340 CDS
T07251
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
pez
Pseudomonas eucalypticola
Pathway
pez02020
Two-component system
pez02025
Biofilm formation - Pseudomonas aeruginosa
pez02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pez00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HWQ56_27340
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HWQ56_27340
09142 Cell motility
02040 Flagellar assembly
HWQ56_27340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pez03021
]
HWQ56_27340
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pez02035
]
HWQ56_27340
Transcription machinery [BR:
pez03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HWQ56_27340
Bacterial motility proteins [BR:
pez02035
]
Flagellar system
Flagellar assembly proteins
Stator
HWQ56_27340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QKZ07295
UniProt:
A0A7D5DC78
LinkDB
All DBs
Position
complement(6083986..6084681)
Genome browser
AA seq
231 aa
AA seq
DB search
MYTAQGKLKSSELLEQYLPLVRRHALELKTRVPANVDLDDLIQAGSIGLLDALARYDTAQ
GATFGTFASQRIRGAMIDELRSRDWAPRSVRRNARALKGVIRRLEQALGRPPEEREIAQA
MDLPLEQYRQLLLDINGCQLMPIEEIAEDDASGVSSGYGASPFVELLQERNRERFVKALD
ALPERERLLLALYYQEKLNFKEIGAVIGVSESRVCQLHSQAVSRLRDALAD
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgtacacagctcagggaaaactaaaatcaagcgagttgctggaacagtacctgccactg
gtacgccgacacgcgcttgagttgaaaaccagggtgccggccaatgtcgatctcgatgac
ctgatacaggccggcagcatcggcctgctcgatgcgttggcgcgttacgacactgcccag
ggtgcgacctttggcaccttcgcttcgcagcgcatccgcggggccatgatcgacgagctg
cgcagccgcgactgggccccccgcagcgtgcgccgcaacgcccgcgcgctgaagggcgtg
ataaggcgcctggaacaggcactgggccgcccgccggaagagcgggagatcgcccaggcc
atggacttgcccctggagcagtatcggcaattgctgctggacatcaacggctgccaattg
atgcccatcgaggaaatcgccgaggatgatgccagcggggtcagcagcggctacggggcc
tcgccttttgtcgaattgctgcaggagcgcaaccgcgagcggttcgtcaaggcccttgat
gcattgcccgagcgggaacgcttgctccttgcgctgtattaccaggaaaagctcaacttc
aaggaaattggcgccgtgatcggggtcagtgagtcgcgggtgtgccagttgcacagccag
gctgtctcgcgcctgcgcgacgccctggccgattag
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