Paenibacillus sp. E222: HW560_04745
Help
Entry
HW560_04745 CDS
T10443
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pezz Paenibacillus sp. E222
Pathway
pezz03030
DNA replication
pezz03430
Mismatch repair
pezz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pezz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HW560_04745 (dnaX)
03430 Mismatch repair
HW560_04745 (dnaX)
03440 Homologous recombination
HW560_04745 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pezz03032
]
HW560_04745 (dnaX)
03400 DNA repair and recombination proteins [BR:
pezz03400
]
HW560_04745 (dnaX)
Enzymes [BR:
pezz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HW560_04745 (dnaX)
DNA replication proteins [BR:
pezz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HW560_04745 (dnaX)
DNA repair and recombination proteins [BR:
pezz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HW560_04745 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
DnaX_C
RuvB_N
AAA_30
TIP49
AAA_22
AAA_5
AAA_16
AAA_19
RCF1-5-like_lid
AAA_assoc_2
AAA_14
AAA_2
Rad17
nSTAND3
PIF1
End3
AAA_28
Mg_chelatase
DUF815
DUF6395
RNA_helicase
ABC_tran
AAA_18
Tho1_MOS11_C
Motif
Other DBs
NCBI-ProteinID:
QLG37479
LinkDB
All DBs
Position
complement(1054000..1055760)
Genome browser
AA seq
586 aa
AA seq
DB search
MEHIALYRAWRPQSFQDMVGQQHIIQTLQNAIREQRTSHAYLFSGPRGTGKTSAAKILAK
AVNCERGPAPEPCNECEACRRITTGAVMDVQEIDAASNRGVEEIRDLREKVKYAPTEVRQ
KVYIIDEVHMLTTEAFNALLKTLEEPPPHVMFILATTEPHRLPATIISRCQRFDFRRVSL
EEQTARLTLICEQEGMEADQDALQYIARLSDGGMRDALSVLDQISSFTDGRVTYQQVMDM
TGGIPSEQFAKLAASLLKGDVGHILQMIEGFMHEGKSADKCMENLLYYFRDLLMIKMVPD
ADKLTDRVLNPESFRDMAESFTKEQLFQMIDTLNRYQSEMKYAVQPQTLFEVALLKLCSI
PAQGASSGQMADSAGAAPAVSAPVDGGEINRLKQQLAELEKKLDRALKSGLSGGEAASSA
PSRPATRAPVSRGNSPAKLPAQLDQYVARKGSPEFTEVSKKWGQILQRVKEEKVTVHAWF
MDGEPVSVLEDNVLVAFKNNIHRETTEKQANREVIERVLSEQLGRSARLVTMMLKDWTGA
MEGAAETPKEDFKLEPEHEDGGSGNKQPWIDEAIQLFGEDLVVIKE
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggagcatatcgcgttataccgggcttggcgtccccagtcgtttcaagatatggtggga
caacagcatattattcagaccttgcagaacgcgattcgtgaacagcggacttcccatgcc
tacttgtttagcgggcccagaggaacagggaagacgagtgccgccaagattttggccaaa
gctgtaaactgcgaacgcgggcctgcgcctgagccttgtaacgagtgtgaagcttgccgc
aggattacgactggcgctgtgatggatgtgcaggaaattgatgccgcatccaaccgtggc
gttgaagaaatccgcgatcttcgggaaaaggtgaaatacgccccgactgaagtccggcag
aaagtgtatattattgacgaagtgcacatgctgacgacagaggcattcaatgcgctgctc
aaaacattggaagagcctccgccacatgtgatgtttattttggcaacgacagaaccccat
cgtcttccggcaacaattatttctcgctgtcagcgatttgattttcgcagagtgtctctg
gaagaacagacagcacgacttacgctgatctgtgaacaggaaggcatggaagccgatcag
gacgcactccagtatattgcccgtctgtctgacgggggaatgagggacgcactcagtgtc
ctggatcagatctcttcctttacagatggaagggtgacctatcagcaggttatggatatg
accggaggcattccttccgaacagtttgcaaagttggctgcttctctgctcaagggcgat
gtaggtcatattttgcagatgatcgaagggttcatgcatgaaggtaagagtgcggacaag
tgcatggaaaatttgctttattatttccgtgatttgcttatgattaagatggtgccggat
gccgataaactgacggatcgggtacttaaccccgagtcgttccgtgatatggcggaatca
ttcaccaaggaacagctgttccagatgattgatacacttaaccggtaccagagtgagatg
aaatatgcagtacagccgcagacgctgtttgaagtagctctccttaaactgtgcagtatt
cctgctcaaggggcgtcatcgggtcagatggcggattcggccggcgctgctcctgctgta
tccgcgccagtggatggcggggagatcaaccgactgaagcaacagcttgctgaactggag
aaaaagctggatcgtgcgcttaagagcggtttgtctgggggagaggctgcatcaagtgct
ccttcacgcccggcaacacgagctccggtgtcgagaggcaattcgccagcgaagttacct
gcacagcttgatcagtatgttgcacgtaagggatctcctgagtttacggaggttagcaag
aagtgggggcagatcctgcagcgcgtcaaagaagagaaagtaaccgttcacgcctggttt
atggatggtgaacctgtatcggtgctggaagacaatgttctggtggcgtttaagaacaac
atccaccgtgaaactacggagaagcaggctaatcgcgaagtgattgaacgggtgctgtct
gaacagcttggacgttcagcgcgtcttgtgacgatgatgctcaaagattggactggagcg
atggaaggagctgctgaaacgccaaaggaggactttaagcttgaacctgagcatgaagac
ggcggttcaggcaacaagcagccttggattgatgaagccatccagctctttggtgaggac
cttgtagtgatcaaagaatag
DBGET
integrated database retrieval system
