Paenibacillus sp. E222: HW560_07510
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Entry
HW560_07510 CDS
T10443
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pezz Paenibacillus sp. E222
Pathway
pezz03022
Basal transcription factors
pezz03420
Nucleotide excision repair
Brite
Enzymes [BR:
pezz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
HW560_07510
Transcription machinery [BR:
pezz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HW560_07510
Chromosome and associated proteins [BR:
pezz03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
HW560_07510
DNA repair and recombination proteins [BR:
pezz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HW560_07510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QLG37971
LinkDB
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Position
1678249..1680570
Genome browser
AA seq
773 aa
AA seq
DB search
MTTAIRISVRPLVEYVYRSGSIRPGFRTNASMQEGTRIHQRVQKDYTEEDLKEVVLEVEL
QHGDLTYVVEGRCDGLIRLDGQLTVDEIKSTAGNLDDLGDGAPVHWAQAMMYAYMYAVQH
DEPRMQVQLTYVHTVSNEERRFRRMLERQELEQFAAELVAGYAPYAEMIVAYEEKRDISV
RELPFPFRKYREGQRKLAGAVYKTIREGQGLMAKAPTGIGKTMSVLFPTVKAIGEGEAKR
LFYLTARTTTRVAAEEAFARMQAEGLKMHVISLTAKDKICFKEEEACDTGQCGMCEGYYD
RINGAVLDMLEHETLMTRPVIEQYARKHRVCPFEFSLDAAYAADAVICDYNYIFDPRISL
KRMLEEQKRKTVLLVDEAHNLVDRGRMMFSAELEKAVFLDVKREFQTLGSSVTAAKAIAD
RTGAIDKYLITLRKNGGEEGKLLQQEAPEELIELLEPFVMVAEQCLVEGGSGNAETDELL
LAAYFTAQNFLRIAKLYDERFITYAECVRSEVRVKLFCLDPSVLLRQTAKGFRSTIHFSA
TLSPLGYYRDMLGAEEEDYTLRIPSPFQREQLDVRLMPLSIRYRDRERSRQPIANMLRQL
VAEWPHSNLLVFFPSYPYMREVHGTYMEQPGEAEVVMQEQGMSEEEREAFLNAFQPHPER
TRLVFAVMGGVFSEGVDLPGDRLNGVVVVGAGLPQIGLENNVLRDYYSRTGRNGFNYAYV
FPGMNKVLQAGGRLIRTEEDKGVLVLVDDRFTEEPYRSLLPEEWQDYTRISPQ
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccgcaattcgaatatcagtcaggccattggtggaatatgtgtatcgcagtggc
agcatacgtccagggtttcgcaccaatgcatcaatgcaggagggaacccggatacaccag
cgggtgcagaaggattacacagaagaggatctgaaggaagtggttctcgaagtggaattg
cagcatggagacttgacctacgtggtggagggacgatgtgacgggctgattcgtctggat
gggcagctgacggtggatgagatcaaatcaactgcgggcaatctggacgatctgggcgat
ggagcccccgtacactgggcacaggccatgatgtatgcctatatgtacgccgttcagcat
gatgaaccccgtatgcaggtacagcttacatacgtgcacaccgtgagtaatgaagaaagg
cggtttcggcggatgctggaacggcaggagctggaacagtttgcagcagagctggtcgct
ggttacgcgccatacgcagagatgattgtggcttatgaagaaaagcgcgatataagcgtg
cgagagctgccttttccttttcgcaaatacagagagggacagcgcaagctggcaggagcc
gtatataagacaatccgcgaggggcagggactgatggcgaaggcgccaacgggtattggc
aaaacgatgtccgtactgtttcccacggttaaggccattggtgaaggagaagccaaacga
ttattctatctgaccgcaagaacgacgacgcgagtggcggcagaagaggcttttgcccgg
atgcaggcggaaggattgaagatgcatgtgatcagtctgaccgcgaaggacaagatctgt
ttcaaggaagaggaagcctgtgatacgggacagtgtggcatgtgcgaaggatattatgat
cgtattaacggagctgtgctggatatgctggaacatgagacgttaatgacacgcccggtt
attgaacagtacgcacgcaagcatcgggtatgtccatttgagttttcactggatgctgcg
tatgcagccgatgcggtgatctgcgactataactatattttcgacccgcgtatctcgctc
aaacgcatgctggaggagcagaagcgcaagacggtattattggtcgatgaggcacataat
ctggttgatcggggccgaatgatgttttcggcagagctggagaaggccgtctttctggat
gtcaaaagggaattccaaaccctgggcagcagtgtgaccgccgctaaagccatcgcggat
cgtacgggcgctatcgacaaatacctgattacgcttcgcaaaaacggtggggaagagggc
aaattgctgcaacaggaggcaccggaggaactgattgaactgctggagccttttgtcatg
gttgcggagcaatgccttgttgaaggcggttcggggaatgcggagacggatgaattgctg
ctggcagcctatttcaccgcacagaatttcctgcgtattgccaagctgtacgatgaacgc
ttcattacctatgcggaatgtgtacgaagtgaagtacgagtgaagctgttctgccttgat
ccgtccgtgctgctgcgccagactgccaaagggttccgttccaccattcatttctctgcg
acattgtcacctcttggttattaccgggatatgttaggtgcggaggaagaggattatacc
ttgcgtattccttcgcctttccagcgagagcagctggatgtgagattgatgccattatcg
attcgctatcgggatcgtgaacgttccagacagcctattgccaatatgctgcgccaattg
gttgccgagtggccgcatagcaacctgctggtctttttcccatcctatccatatatgcgc
gaagtccatgggacgtatatggaacagccgggcgaggcagaagtcgtgatgcaggagcag
ggcatgagtgaagaggaacgggaggcgtttctgaacgcgttccagccacatccggaacga
acacgattggtatttgccgttatgggcggtgtgttttccgaaggtgtggatctgccgggt
gatcgtctgaatggagttgtggtggtcggtgccggacttccccagattggtctggagaac
aacgtactccgcgattattatagtcgtactgggcgcaacggattcaattatgcctatgtt
ttccccgggatgaacaaggtattgcaggcgggtggaaggctgatacgtacagaagaggac
aagggcgtactggtactggtcgacgatcgtttcaccgaggaaccgtatcgttcattgctg
cccgaggaatggcaggactacacacggatttcaccccaataa
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