Paenibacillus sp. E222: HW560_08560
Help
Entry
HW560_08560 CDS
T10443
Symbol
spoIID
Name
(GenBank) stage II sporulation protein D
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
pezz Paenibacillus sp. E222
Brite
KEGG Orthology (KO) [BR:
pezz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pezz01011
]
HW560_08560 (spoIID)
Enzymes [BR:
pezz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HW560_08560 (spoIID)
Peptidoglycan biosynthesis and degradation proteins [BR:
pezz01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HW560_08560 (spoIID)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIID
Glycoprot_B_PH2
Motif
Other DBs
NCBI-ProteinID:
QLG38165
LinkDB
All DBs
Position
1944738..1946084
Genome browser
AA seq
448 aa
AA seq
DB search
MKEARVQVKVPLVPRPLVKEPEEIAGFGVEKDKLASTNIRTVPDEPVTTSPRRPGSQQEP
AQQPAARIHMPVIELDQFRRVKRRRMRTFGRGRRWGKNNTRWQPAAAVSAVLALALLIPA
ILVWPRTDDPVKPIPVPPGTGSVTTPAPSPAVPVTYPEPQVRVYLSATGTTMNLPLEDYV
TGVVAAEMPAEFRLEALKAQAIAARTFIVRRLAANDTSGVPSGEADVTDTVSHQVFIPPE
QVKADWTRLGKAKEWEKLQQAVRESKDSVMTYQGKAITASFFSTSNGYTENAEDVWGNPV
PYLQSVASPWDKNLAPGFKETITMKRNEILQKLNLGANAIPVSAQQSGGWMEVLSTTQGH
RIKEMQIAGKTFSGPEVRKLLGLRSSQFSWKTDGDEVQITTYGYGHGVGMSQWGANGMAQ
EGHTATQILKHYYTGISFGQASKMLASK
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagcccgtgtgcaggttaaggtacctcttgtcccacgtccactagtgaaggag
cctgaagaaattgctggtttcggtgtggaaaaagacaagcttgcttcaacgaacattaga
acggttccagatgagcccgtaacaacatctcctagacggcctggctcccaacaggagcca
gctcaacagcctgcggcacgtatacacatgcctgtcattgaattagatcagtttcgtcgt
gtgaagcgccgccgaatgcgtacgttcggccgaggccgcagatggggcaagaacaatact
cgttggcagcccgcagcagctgtatcggcagtactggcgcttgcgttgttgatccccgcc
attttggtctggcctcggacggatgatcctgttaaacccatccctgtcccaccaggtaca
ggcagtgtaacgactccagcaccttctccagctgtacctgttacctatcctgaacctcaa
gtaagggtttacctgtcagcaaccggtacaacgatgaatcttccccttgaagattatgtt
accggagttgtcgctgccgagatgccagcggagttcagattggaggctctgaaggcacag
gctattgctgcaaggacatttatcgtgagaaggctggcagccaacgatacaagcggtgta
ccttcaggagaagctgatgtaacggatactgtgagtcatcaggtatttataccaccagaa
caagtaaaagccgactggacacgtctggggaaagcgaaggaatgggagaagctgcagcag
gctgtacgcgaaagcaaagattccgtcatgacatatcaaggcaaggcaattactgcatcc
tttttctccacaagtaatgggtatacggaaaatgctgaggatgtatggggcaaccctgta
ccttatttacaaagcgtagcgagtccgtgggataaaaacctggctccgggctttaaggaa
accatcaccatgaagcgcaatgagattctccaaaagttgaatctgggggcaaatgccatc
cctgtgagcgcgcagcagagcggtgggtggatggaagtgttgtctacaacgcagggccat
cgcatcaaggagatgcagattgcaggtaaaacgtttagcgggccggaggttcgaaagctg
cttgggcttcgatccagccagttcagctggaagaccgatggagacgaggttcagattaca
acgtatggatacggtcacggagtcggcatgagccagtggggagccaacggcatggcacag
gagggtcacacagcgacccagattctcaaacactactacacaggtatctccttcggacag
gcatccaagatgctagcctcaaagtag
DBGET
integrated database retrieval system
