Paenibacillus sp. E222: HW560_09065
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Entry
HW560_09065 CDS
T10443
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pezz Paenibacillus sp. E222
Pathway
pezz03420
Nucleotide excision repair
pezz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pezz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HW560_09065 (pcrA)
03430 Mismatch repair
HW560_09065 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pezz03400
]
HW560_09065 (pcrA)
Enzymes [BR:
pezz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HW560_09065 (pcrA)
DNA repair and recombination proteins [BR:
pezz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HW560_09065 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
HW560_09065 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
GBS_Bsp-like
ResIII
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
QLG38258
LinkDB
All DBs
Position
2080098..2082461
Genome browser
AA seq
787 aa
AA seq
DB search
MQPVNIHDAVARLNPPQRQAVEATDGPLLIMAGAGSGKTRVLTHRIAYLIATRKAPPWGI
LAITFTNKAAREMQDRVSQLVGGSQGRDIWVSTFHSMCVRILRRDIERIGFTSNFSILDS
SDQLSVIRSCMKDQNIDTKKFEPKAVQSMMSTAKNELISPEQYEKQAADYFEGIVAKVYK
MYQKRLRANNSLDFDDLIMATIQLFKEVPEVLDFYQKKFQYIHVDEYQDTNRAQYMLCRM
LADSHHRICVVGDSDQSIYRWRGADISNILNFEKDYPEANTILLEQNYRSTSNILNAANE
VIGLNTGRKPKKLWTDKEGGSKIKVYRADSEHDEGYFVTSEISKNVKNGKSYQNHAVLYR
TNAQSRVIEEILIKSDIPYQIVGGIKFYDRKEIKDILAYLRLLSNPDDDISLTRIINVPK
RSIGDTTVAKLAAAAGERGISIYRVLQVVDDLGFAGRTRNALVEFYDMIAALHQMVEYLS
VTELTEKILEMSQYRLEMQNENTLESRARLENIDEFLSVTMEFEKNNEDKTLVSFLTDLA
LIADIDSMNDDEEDQSDAVTLMTMHSAKGLEFPVVFIVGMEEGVFPHSRAFMDNEELEEE
RRLAYVGITRAEEQLFLSCAQMRTLFGRTTANPPSRFLDEIPDELKEDTSIARDRYRRGS
SAGGSYGGRGLGASGGSNFGGGASKLFDRQSQSGSSASSVTSSRVTMSTSSSTSSTPAPS
SASKPVAAGAGSDGFKAGDKVQHGKWGTGTIVGVKGSGNDTELQIAFPAPVGLKRLLAGF
APITKVE
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctgtaaatatacatgatgccgttgcacggcttaacccccctcaacggcaagcc
gtcgaggcgacggatggaccgctattgattatggccggagcgggcagtggcaagacccgg
gtgctcacacaccggattgcctatcttattgcaacacgcaaagcacccccgtggggcatt
ttggctattacgtttacgaacaaagcagcacgcgagatgcaagaccgggtatcccaactg
gttggcggctctcagggtcgtgacatctgggtatcaacgttccactccatgtgcgtgcgt
attctgcgccgtgacattgaacgcatcggcttcacctccaatttcagcattttggattca
tctgatcaattatctgtaatccgtagctgtatgaaagaccagaacatcgacaccaagaaa
tttgaaccaaaagctgttcaatcgatgatgagtaccgcgaagaatgaattgatcagtccg
gagcaatatgagaagcaggctgctgactattttgaaggcattgtggcgaaagtgtataag
atgtaccagaaacggctccgtgctaacaactcgctcgactttgacgatctcatcatggcg
actattcaacttttcaaagaggtaccggaagttctcgacttttaccaaaagaaattccag
tacattcacgtggatgagtaccaggataccaaccgtgcgcagtacatgctgtgccgtatg
ctcgctgatagtcatcaccgcatttgcgtcgtaggggatagtgaccaatcaatctaccgc
tggcgtggagcggatatcagcaacatcctgaattttgagaaagactaccctgaagccaat
acgattttgctcgagcagaactatcgttccacttcgaatatcctgaatgcagcgaatgag
gtaatcggcctgaatactgggcgcaaaccgaagaaactgtggacggacaaagagggtggc
tccaagatcaaggtgtaccgtgcggattccgaacatgatgaggggtattttgtaacttcc
gagattagtaaaaatgtgaagaacggcaaatcctatcagaatcacgctgttttgtaccgt
accaatgcccagtcccgggttatagaggaaattctgatcaagtctgatattccgtatcag
atcgttggcggcatcaagttctatgatcgtaaagagatcaaggacattctggcgtatctg
cgcctgctttccaaccctgatgatgacatcagccttacccggattattaatgtaccgaaa
cgcagcattggtgatacaacggtagcgaagctggcagctgcagcaggagaacgagggatt
tcaatataccgtgtgcttcaggtcgtggatgatctcggttttgccggtcgaacgcggaat
gcgctggtggagttctatgacatgatcgccgcgctgcatcagatggtagaatacttgtct
gtgaccgaattgaccgagaagattctcgagatgagccagtaccgacttgagatgcaaaat
gaaaacacacttgaatcccgtgcacggctcgagaacatcgatgagtttctgtccgttacc
atggaatttgagaaaaataatgaagacaaaacacttgtttcgttcctcaccgatctcgca
ctgattgcggatatcgacagcatgaacgatgatgaagaagatcagagtgacgcggttact
ctgatgacgatgcacagtgccaaaggtctggaattccctgtcgtctttatcgttggtatg
gaggagggagttttcccgcacagccgggcctttatggataacgaggagctggaggaagaa
cgcagactggcttatgtgggcattacgcgtgcggaagaacaactcttcctgtcttgcgca
caaatgcggaccttgttcggacgcacaacggcgaacccgccttcacgcttcctggatgaa
attccggatgagctcaaagaagatacctccatcgctcgtgaccgctatcgtcgtggtagc
agcgcaggtggatcatatggtggccgtggacttggtgcaagtggagggagcaattttggt
ggcggagcaagcaagctgtttgatcgtcagagccaaagcggttcttccgcttcgtcagtt
acttcctcacgggttaccatgagtacgtcgtccagcacatccagcacgcctgccccgtcg
tcggcatctaaaccggttgctgccggagctggttctgatggtttcaaagcaggagataaa
gtacaacacggaaaatggggaacaggtaccattgttggggtgaaaggctcgggtaatgac
acagagcttcagatcgcattcccggccccggttggcctaaaacgtctgcttgcaggcttt
gccccaatcaccaaagtggaatag
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