Paenibacillus sp. E222: HW560_09415
Help
Entry
HW560_09415 CDS
T10443
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pezz Paenibacillus sp. E222
Pathway
pezz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pezz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HW560_09415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pezz03021
]
HW560_09415
03400 DNA repair and recombination proteins [BR:
pezz03400
]
HW560_09415
Enzymes [BR:
pezz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HW560_09415
Transcription machinery [BR:
pezz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HW560_09415
DNA repair and recombination proteins [BR:
pezz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HW560_09415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
PASTA
Motif
Other DBs
NCBI-ProteinID:
QLG38321
LinkDB
All DBs
Position
2143561..2144505
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVDVNDDGTYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVSSVQIDG
VLHEFATVPGVMEDVTEIILNLKALSLKIHSDEEKVLEIDAEGEGAITAGDIRADSDVEI
LNPDLHIATLGPGSRLHMRIFANRGRGYVQADRNKRDDQPIGVIPVDSIFTPISRVNYAV
ENTRVGQVTNYDKLTLEVWTDGSIRPEEAVSLGAKILTEHLMLFVGLTDEAKDAEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTTKTEEDMMKVRNLGRKSLEEVQ
EKLEELGLGLRTEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtgattgaaatcgaaaagccgaaaattgagacggtagacgtcaacgatgatggcacctat
gggaaattcgtagtagaaccgctagagcgcggatacggtacgacgcttggaaactcgctt
cgtcgcatcttgctctcgtcactgccgggtgcggcagtgtcttcggttcaaatcgatggc
gttctgcatgaatttgctacagttcctggcgttatggaagatgttacggagatcatcctt
aacctgaaagctttgtcgctcaaaattcactcggacgaggagaaagtgctcgagattgat
gctgaaggcgaaggagcaattacggctggagatatccgtgctgactccgatgtggaaatt
cttaacccggatttgcacattgctacgctcggaccaggttcgagacttcacatgcgtatt
tttgccaatcgcggtcgcggctacgtccaggcagatcggaataaacgcgatgaccagccg
atcggcgtcatcccagtcgattccatcttcaccccgatcagccgcgtaaactacgctgtg
gaaaatacgcgtgtcggccaagtaaccaactatgacaagctcacgttggaagtttggact
gacggaagtattcgtcctgaagaggctgtaagccttggcgctaaaattttgaccgagcat
ctgatgctcttcgtgggtcttacagacgaagcgaaagatgcagagattatggtcgaaaaa
gaagaagacaaaaaagaaaaagtactcgaaatgacgatcgaagagctggatctctctgtt
cgttcttacaactgcctcaaacgtgccggtattaataccgtgcaagagctgactacgaaa
acagaagaagacatgatgaaagtccgtaacctcggacgcaagtctttggaagaagttcaa
gagaagcttgaggaacttggtttgggactccgtacagaagaatag
DBGET
integrated database retrieval system
