Paenibacillus sp. E222: HW560_14625
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Entry
HW560_14625 CDS
T10443
Name
(GenBank) transcriptional regulator
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
pezz Paenibacillus sp. E222
Pathway
pezz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pezz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HW560_14625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pezz03000
]
HW560_14625
Transcription factors [BR:
pezz03000
]
Prokaryotic type
Helix-turn-helix
Other families
HW560_14625
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_1
TPR_2
TPR_10
HTH_3
ARM_TT21_5th
TPR_11
TPR_16
TPR_8
Motif
Other DBs
NCBI-ProteinID:
QLG39199
LinkDB
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Position
3280122..3281363
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AA seq
413 aa
AA seq
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MIEGKIIKFYREKHRRTQGELVKGICSVTHLSKIERGMTEYSQEIMDMLCERLYIDMARE
VTRYHQMNNVLDSWQEAIIMQRTAEAIRLKDKLEEEPLKGIPDLRLSYDLLQIRFYLFMN
DMDEAERLIAEMEIPDESEHSYEHYFYHHVMGIYYFLTGHYTKSIQTLTSINQSKYTNHE
YFYHLSLAYHSIYSNITSYYYAEKAIQHFRKTLNMVRIIDTETIMLVQLNSREYHDFSET
KRRYENLIRICEDCGFIDRKAKLLNNLGYEYNRRKQYEDAAYWYRQALDIIPEKQPLYLM
VLNNYIETCRLGKLIPANTLLDMSLKALHNSKLVADASYMELELQSVILQGQEQAYYEMI
EERILPYYRELGSQYLAERYEEILFQYYMKHGEKDKALRLAKNRFKSQATLLI
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagggaagattattaaattttaccgggagaaacatagacgaactcaaggagaa
ctggtgaaaggaatctgttcagtcacacatctgagcaaaattgagcggggaatgacagag
tattcacaggaaattatggatatgctctgtgagcgattgtacattgatatggcaagggaa
gtaacaagatatcatcagatgaacaatgttctggattcatggcaagaggccattattatg
cagagaacagcggaagctattcgtctcaaagacaagttggaagaagaaccgttaaaaggt
atacctgacttgcgtttatcttatgacttgctgcagatccgattttacttgtttatgaat
gatatggatgaagcagaaaggcttattgccgagatggaaattccggatgaatcggagcat
tcgtatgagcattatttttatcaccatgtgatggggatttactatttcctcacagggcat
tatacgaaatcgatccagaccctgacttcaataaatcaatccaaatatacgaatcatgaa
tacttttatcatttgtctctggcctatcactcgatatattcgaatattacgtcttactat
tacgctgagaaagctatccagcattttcggaaaactctcaatatggtgcggatcattgat
accgaaaccattatgctggttcagctcaattctcgtgagtatcatgatttttctgagacg
aaacgcagatatgagaatctcattcggatttgtgaggattgtggttttattgaccgaaag
gccaagctgctgaacaatctgggttatgaatataaccggcggaagcaatatgaggatgct
gcttactggtacagacaagcgcttgatattataccggagaaacaaccgttatacctgatg
gtgctcaataattacatagaaacgtgtagactgggtaagctcattcctgcaaacacgcta
ttggatatgtctctgaaagccttgcacaactctaaacttgttgcagacgcaagttatatg
gaattggaactccagtctgtcattttacaagggcaggagcaagcgtattatgaaatgata
gaagagcgaattcttccttattatcgtgaacttggttcccaatatctcgccgaacgttat
gaagagatattgttccagtactatatgaaacatggtgaaaaggataaggcgctcaggctc
gcaaaaaatcgttttaaatcccaagcgactctacttatttaa
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