Paenibacillus sp. E222: HW560_14945
Help
Entry
HW560_14945 CDS
T10443
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pezz Paenibacillus sp. E222
Brite
KEGG Orthology (KO) [BR:
pezz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pezz03400
]
HW560_14945
DNA repair and recombination proteins [BR:
pezz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HW560_14945
Archaeal homologous recombinant proteins
HW560_14945
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QLG39261
LinkDB
All DBs
Position
3352579..3356007
Genome browser
AA seq
1142 aa
AA seq
DB search
MKPILLKVAGLQSYREAQEIDFTVLTETGLFGIFGPTGSGKSSLLDAITLAMYGKVERAV
NGTQGIMNHAEDSLSVAFTFELVSAEGTRRFRVERRFKRNNEVSVSNTISKFIETVNGEE
QVLADKLADVNRCVEDVIGLKMDDFTRAVVLPQGKFAEFLSLKGSERRQMLQRLFHLEKY
GDQLAIKLSRRVKDNDMVHQSLAAEQQGLGNASKETLAETELLLQAAVKQSELSRKTLDE
AMKEAEELGKVRELSHERQARMEEHEKLKARSPQIEAGEQRLKQAGAADAILPSLQTMRD
AAAQQKLREDAAGIAHQQAVEHERLSVLEAEKAETARVQMAEEEPKLLLRLEQLEQAKEL
QRERDGLREDRTRLKQLLDKGQAEQSVIGQQLEKEKELQQRGRKRREELQESLKPNEVKS
EERRQLQAALELKHRLDTAAEQLRQNKAEMEANKQSAEQGADRLKLAAQEESRLSEQRQH
LIGKAAMGLEALLACEQDIGREQSLLAKAEEQLRGTMREQELHRLSSALRAELRDGEPCP
VCGSAHHPLPAAPPGEGPPAGDADLELLRSLHAELQELQELRFGLRQQLHERRSLLTQLG
AAAGEAPAAAEAAPAAAEPEPAGSPVHGRSPADWAERAAALREAARALAAAAAPLQAEAA
ALQQAASGAQQRRMEAAAAQEAGQAGLAQAERRLAESEAAAAALHGRWAAELPGIAQEQA
MALHQAMQERDARAEDIKERLNKSVTFLEEKEQLVQSLQQKLVELDKQLIQWQTEWQGNS
KQLAEKEERLRQWVGEQRVEDLIAAAQTRLDELRKIAADSAQRFKEADALKQESAKRDVM
AHQAAASAAEHLQQAQERWKQLLDQSPFDSESAVVEAALPSQEAERLAAEIQQHRERDRE
LVSQLRELEQKLGGAVVSEEQWLACTERLKQSRAEDEAALRAKARAERDLEDVQQRHVRW
TELENKRVEVSRQGEMLSKLQAAFRGNAFVEYIAEEQLMQVSQAASQRLRFLTKQRYSLE
VDSGGGFVICDDANGGVKRPVSTLSGGETFLTSLSLALALSAQIQLRGQYPLQFFFLDEG
FGTLDPELLDTVITSLEKLHDDRLAVGIISHVPELRARLPRKLVVIPAGEAGAGSRVVLE
TL
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
ttgaagccgattttattgaaagttgctggcctgcaaagttatcgggaggctcaggagatt
gattttaccgtattgacggaaacgggactgttcggcatttttggtcctacaggcagtggg
aagtcttctttgctcgacgcgattacgctggcgatgtacggaaaagtggaacgtgcggtt
aatggtacccagggaatcatgaatcacgctgaggattcgttgtccgttgcttttacattt
gaacttgtatcggcagaaggcacaagaagatttcgggtggaacgacgtttcaaacgaaac
aatgaggtttcggtgagcaacaccatcagcaaattcattgagaccgtcaacggagaggaa
caggtgctggctgataaactggcagacgtgaaccgatgcgttgaagatgtaatcggattg
aaaatggatgattttacgcgagccgttgtgcttccacaaggtaaattcgctgagtttcta
tcgctgaaaggcagtgaaagacgccagatgcttcaacgtttattccatttggagaagtat
ggagatcagcttgccatcaagctcagccggcgggtgaaggataatgatatggttcatcag
tcattggcggcggagcagcaggggcttgggaatgcgagcaaagagacgttggcagaaacg
gagcttcttcttcaagctgctgtgaaacagtctgaattgtcacgcaaaacgcttgatgaa
gcgatgaaggaagctgaagagcttggcaaagttcgtgagttaagccatgaacgtcaagct
cgtatggaggaacacgaaaagctgaaagcacgttcaccacagatcgaagctggggaacaa
cggctgaaacaggccggggcggcagatgcgatcctcccttcattgcagacgatgcgtgat
gcagcagcacagcagaagttgcgtgaggatgcagccggcattgctcaccagcaagcggtg
gaacatgaacggctgtctgtactggaagccgagaaggccgaaacggcccgtgtacagatg
gctgaggaagaaccaaagttgctgcttcgattggaacagctggaacaggccaaggagtta
cagcgggaacgtgacgggctccgtgaggatcgtacacgtcttaagcagcttttggacaaa
gggcaggctgagcagagtgtcatcggacaacagctggagaaggagaaagaactacagcag
cgtggccgcaaacggcgggaagaattacaggaaagcctcaagccgaatgaagtgaagtcc
gaagaacgcagacagctgcaggccgcactggaattgaagcatcgattggatactgcggcg
gagcaattgcgccaaaacaaggctgagatggaagctaataagcagtcggctgaacagggg
gcagacaggctgaagctggctgcccaggaagagagccgtctgagtgaacagcgtcagcat
ctgatcggaaaggcggcaatgggtctggaggccttgcttgcctgtgagcaggacattggc
cgcgaacagagcctgctggccaaggcggaggagcagctgcgcggaaccatgcgtgagcag
gagctgcatcggctctcctccgccttgcgcgccgagctgcgcgacggcgagccatgcccg
gtgtgcggctccgcacaccacccgctcccggcggcgccgccgggagaaggtccgcccgca
ggcgatgcggacctggaactgctgcgcagcctgcatgcggagctgcaggagctgcaggag
ctgcgctttgggctgcgccagcagctgcacgaacgtcgcagcctgctgacgcagcttggc
gctgcggccggcgaagccccggccgcagccgaggccgcgcctgcggctgcggagccggag
cccgccggttcgcccgtacacgggcgctccccggcggactgggcggagcgtgccgccgcg
ctacgcgaagccgcgcgggcgctggccgcagccgcagcgccgctgcaagcggaagccgcc
gcgttgcagcaggcggcttcaggcgcgcagcagcgccgcatggaagcggcggctgcgcag
gaggccggccaagccggactcgcccaggcggagcgccggttggccgagagcgaggccgcc
gcagccgcattgcacggccgctgggccgcggaattgccaggcatcgcccaagagcaggcc
atggccctccaccaggcgatgcaggagcgcgacgcgcgcgcagaagacatcaaggaacgg
ctgaacaaaagtgtgacgttccttgaggaaaaggaacagctcgtacagtccctccagcag
aagctggttgagttggacaaacagctgatccagtggcaaacggaatggcaagggaacagc
aaacagctcgccgagaaggaagaacgtttgcgccaatgggttggcgagcagcgggtcgag
gatttgattgctgcggctcagactcgattggatgagctgcggaaaattgctgccgattca
gcccagcgtttcaaggaagcggatgcgttgaaacaggaatcggccaagagggatgtcatg
gctcatcaagcagcagcctcggcagcagagcatttgcagcaggcacaggaacgctggaag
caattgctggatcaatcgccatttgactccgagagtgccgttgtggaagcagcccttcct
tcccaggaagcagagcggctggcggcggaaattcagcagcatcgggagcgtgatcgtgaa
cttgtttcccaattgcgtgagctggaacaaaaactgggcggtgctgttgtatccgaggaa
caatggttggcatgcactgagcgactgaagcagtctcgtgcagaggatgaagcggcactt
agagccaaggcgcgtgcagaacgggatctggaagatgtgcagcagcgacatgttcgctgg
acggagttggagaacaaacgggtggaagtcagccgacaaggtgagatgcttagcaaactg
caagcagctttcagaggtaatgcgtttgtcgagtatattgcagaagaacagctgatgcag
gtcagtcaggctgcttcacagcgtctgcgcttcctgaccaaacaacgttattcacttgag
gtggattcaggcggcggctttgtcatctgtgatgatgcaaacggtggagtcaaacgtccg
gtgtccaccttgtctggtggagagacgttcctgacctcgttgtcactggccctggctctg
tctgcccagattcagctgcgcggccagtacccgctgcaatttttcttcctggatgaaggc
tttggtacacttgaccctgaattgctggataccgtcattacatcgttagaaaaactgcat
gatgaccgtcttgccgtcggtattatcagccacgttccggagctgcgagcacgcttgcca
cgcaaacttgtagttattccagcgggcgaagccggagctggctctcgcgtagtattggaa
acattatag
DBGET
integrated database retrieval system
