Paenibacillus sp. E222: HW560_16160
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Entry
HW560_16160 CDS
T10443
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
pezz Paenibacillus sp. E222
Pathway
pezz03022
Basal transcription factors
pezz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pezz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HW560_16160
09124 Replication and repair
03420 Nucleotide excision repair
HW560_16160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pezz03021
]
HW560_16160
03400 DNA repair and recombination proteins [BR:
pezz03400
]
HW560_16160
Enzymes [BR:
pezz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HW560_16160
Transcription machinery [BR:
pezz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HW560_16160
DNA repair and recombination proteins [BR:
pezz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HW560_16160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
AAA_22
HSR
WWC1
Motif
Other DBs
NCBI-ProteinID:
QLG39477
LinkDB
All DBs
Position
3588968..3590644
Genome browser
AA seq
558 aa
AA seq
DB search
MEKTDACIVQRDFTVLLEVGHHGFDQARAQLGMYAELVKTPAAFHTYRITALSLWNAAAL
GWSADQVIASLEYVSRWNVPAALIQDIQRIIHQYGKLQLRPEANHGRMRLVSEDERLLDE
LSSMKTISAFRMERVDPHELMLGGEQRGLLKRELTRLGYPVLDYAGYREGTSLPFEWRAN
TLGDSSDGFRLRPYQRDAVDAFEGSEGMGGSGLLVLPCGAGKTVIGMAVLERLQCECLIL
TSNTTSVRQWIQELQDKTTITSEQIGEYSGQKKQVKPVTVATYQILTHRKSKDADFTHIK
LLSERQWGLIIYDEVHLLPAPVFRATADIQATRRLGLTATLVREDGCEQDVFSLIGPKLY
DMPWKELEQQGWIANVECQEIRIPFTPELRSNYLEAEVKHQFRLAAENPAKLAVIKRILD
HHEGMPALVIGQYLDQLESIAREIEAPLISGTMSQQERVKWFAAFRRGEIKTIVVSKVAN
FAVDLPDAAVALEISGSFGSRQEEAQRLGRILRPKSGKNKAYFYALVSEDSKEQEFALRR
QMFLVEQGYEYKIVHELQ
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaacggacgcctgcattgtccagcgtgattttacagtattgcttgaagtgggc
catcatggatttgaccaagcccgagctcaattagggatgtatgccgaactggtgaagaca
cccgcggcttttcatacctatcgtatcactgcattatcgttgtggaatgcggctgcactc
ggatggagtgctgatcaagtgatagcaagtctggaatacgtgtctcgttggaatgttcct
gccgccctgattcaggatatccagagaattatccatcaatatgggaagcttcaactgagg
ccagaagcgaatcatgggagaatgcgtctcgtgagtgaagacgaacgattgctggatgaa
ttaagcagtatgaagaccatctcggcttttcgaatggaacgtgtcgatccccatgagctt
atgcttggcggtgagcaacgcggattgttgaagcgggaattgacccgtttgggttatccg
gtgctggattatgcgggatatcgagaaggaacaagtctgccgttcgaatggcgagctaat
acgctaggcgacagttctgatggcttccggttgcgcccgtaccaacgagatgctgtggat
gcttttgaaggtagcgaaggcatgggaggaagtggtctgcttgttcttccctgcggtgca
ggcaaaacggttattgggatggctgtattagagcgtttacaatgtgaatgccttatcttg
acctcgaataccacatccgtgcgtcaatggattcaggaattgcaggataaaacaacgata
acgagtgaacagattggtgagtattccggtcagaaaaaacaggtgaaacctgtgaccgtg
gctacttatcagattcttacacatcgaaaatcgaaagatgctgattttactcatatcaaa
ttgcttagtgaacgtcagtggggacttatcatttatgatgaggtccatctgctgccagca
cctgtatttcgggctactgcagatattcaggctacgagaagactgggattgacagcaaca
ttggtgcgtgaggatggctgtgaacaggatgtgttttcactaattggtccgaaactatat
gacatgccatggaaagaattggaacagcaaggctggattgctaatgtagaatgtcaggaa
atacgcatcccgtttactcctgaactacgatcaaactatttggaagcagaggtgaaacat
caatttcgccttgcagcggaaaatccggccaaattagctgtgatcaaacggatattggac
catcatgaggggatgccagcgcttgtcatcggacagtatttggatcagcttgagagcatt
gcccgggaaattgaagcgccgctcatatcgggtacgatgtcgcagcaagagcgagtgaaa
tggtttgcagcgttccggcgtggtgagatcaaaacgattgtagtatccaaagttgccaat
tttgccgtagacttgccggatgctgctgttgcacttgaaatatccggaagtttcggttca
aggcaggaagaagcccagcgattgggtcggatcttaaggccgaagtccggaaaaaataaa
gcttatttctatgcccttgtgtccgaggacagtaaggaacaggagtttgcattacgtcgt
cagatgtttctggtcgaacaaggatatgagtacaaaatcgttcatgaattgcaatga
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