Paenibacillus sp. E222: HW560_17335
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Entry
HW560_17335 CDS
T10443
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
pezz Paenibacillus sp. E222
Pathway
pezz03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pezz00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HW560_17335 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pezz03011
]
HW560_17335 (rpsA)
Ribosome [BR:
pezz03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
HW560_17335 (rpsA)
Bacteria
HW560_17335 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
OB_RRP5_4th
RNase_II_C_S1
S1_2
DUF2110
Motif
Other DBs
NCBI-ProteinID:
QLG39691
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All DBs
Position
3843125..3844339
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AA seq
404 aa
AA seq
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MSEEMKNQEATQDELDQFVSLKKGDTVKGTIVKLEDNQAYVSIGYKYDGVIPIRELSSLH
VDSASDAVEVGQEVEAKVLSIDDEKEKLVLSKRAIDSENAWDQLQKHFEDQDVFEVVVAD
VVKGGLVADVGVRGFIPASMVERHFVEDFSDYKGRTLRVKVKEIDRENNKVILSQKDVLE
QEFEANKATVMAGLQEGQVIEGTVQRLTQFGAFVDVGGVDGLVHVSELAWTHVDKPSDVL
SEGDKVNVKVLKVDPEKGKISLSMKAVQPGPWETAGDKFNSSDIVTGVVKRLVDFGAFVE
IAPGVEGLVHISQISHKHIGTPHEVLKEGQEVQVKILDMNPSEQRVSLSIKETEEAPAQA
PKSERPARNNAPREEINNPNVSLSNQGLSITLGERFGDKLSKFK
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaagaaatgaaaaatcaagaagcaacccaagatgagttggatcaattcgtttcc
ttgaaaaaaggagataccgtaaaaggaaccatcgtcaaattggaagataaccaagcctat
gtgagcattggatataaatatgacggtgtaattccaattcgtgaactgtcttccctacac
gtagacagcgcgtctgatgcagttgaagttggacaagaagttgaagctaaagtacttagc
atcgacgacgagaaagaaaaactcgttctgtccaaacgtgcaatcgacagcgaaaacgct
tgggatcaattgcaaaagcattttgaagaccaagacgtattcgaagttgttgtagctgac
gttgttaaaggcggtctggtagcagacgtgggcgtacgcggatttatcccggcttccatg
gtagagcgccatttcgttgaagatttcagcgattacaaaggacgcacattgcgtgttaaa
gtgaaagagatcgaccgtgagaacaacaaagtgatcctttcccaaaaagacgtacttgag
caagaattcgaagcaaacaaagctacggttatggctggtttgcaagaaggtcaagttatc
gaaggtacagtacaacgcttgactcaattcggtgctttcgttgatgtgggcggagtagac
ggattggttcacgtatccgagctggcttggacacacgttgacaaaccatcggacgttctg
tctgaaggcgataaagtaaacgttaaagtgctgaaagttgatcctgaaaaaggtaaaatc
agcctgagcatgaaagctgttcaaccaggtccttgggaaacagctggcgacaaattcaat
tctagcgatatcgtaacaggtgttgtaaaacgtctggttgacttcggtgctttcgttgaa
atcgctcctggtgttgagggacttgtgcatatctcgcaaatctcccacaaacatattggc
actccgcacgaagtgttgaaagaaggacaagaagttcaagttaaaatcttggatatgaat
ccttctgagcaacgtgtaagcctgagcattaaggaaactgaagaagctcctgctcaagca
ccaaaatcagaaagacctgctagaaacaacgctccacgtgaagaaatcaacaacccgaac
gtttccttgagcaatcaaggtctgagcatcacgctcggcgagcgcttcggtgacaaactt
agcaaattcaaataa
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