Paenibacillus sp. E222: HW560_17405
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Entry
HW560_17405 CDS
T10443
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pezz Paenibacillus sp. E222
Brite
KEGG Orthology (KO) [BR:
pezz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pezz03032
]
HW560_17405
03036 Chromosome and associated proteins [BR:
pezz03036
]
HW560_17405
03400 DNA repair and recombination proteins [BR:
pezz03400
]
HW560_17405
DNA replication proteins [BR:
pezz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HW560_17405
Chromosome and associated proteins [BR:
pezz03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HW560_17405
DNA repair and recombination proteins [BR:
pezz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HW560_17405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-CCDC81_euk_1
DUF2267
DUF1512_C
HU-DNA_bdg
Rpf1_C
Motif
Other DBs
NCBI-ProteinID:
QLG39703
LinkDB
All DBs
Position
3856753..3857025
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSDLITHVSEATELSKKDVTKAVDAVFEAISEALQSGDKVQLVGFGNFEVRERSARKG
RNPQTGEEIEIPASKIPAFKPGKALKDGIK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatcagacttgattacacacgtgtctgaagcgacagaattgtccaaaaaggat
gtaacgaaagcggttgatgccgtattcgaagcaatctctgaggctcttcaaagcggagac
aaagtacaattggttggttttgggaacttcgaagttcgcgagcgctctgcacgtaaagga
cgcaacccgcaaacaggtgaagaaatcgaaattcctgcgagcaaaattcctgcattcaaa
ccaggtaaagcgctcaaagacggaattaaataa
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