Paenibacillus sp. E222: HW560_24185
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Entry
HW560_24185 CDS
T10443
Symbol
lsa
Name
(GenBank) Lsa family ABC-F type ribosomal protection protein
KO
K19350
lincosamide and streptogramin A transport system ATP-binding/permease protein
Organism
pezz Paenibacillus sp. E222
Pathway
pezz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pezz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HW560_24185 (lsa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pezz02000
]
HW560_24185 (lsa)
01504 Antimicrobial resistance genes [BR:
pezz01504
]
HW560_24185 (lsa)
Transporters [BR:
pezz02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
HW560_24185 (lsa)
Antimicrobial resistance genes [BR:
pezz01504
]
Gene variants
Macrolide resistance genes
Transporters
HW560_24185 (lsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
KAP_NTPase
AAA_29
MMR_HSR1
RsgA_GTPase
NB-ARC
Dynamin_N
AAA_22
DUF5906
YobI-ATPase
AAA_23
SprA-related
nSTAND6
ATP-synt_ab
Leu_zip
ABC_tran_Xtn
Motif
Other DBs
NCBI-ProteinID:
QLG40900
LinkDB
All DBs
Position
complement(5447274..5448752)
Genome browser
AA seq
492 aa
AA seq
DB search
MSLINVSNLTFAYDGSYDNIFENVSFQLDSDWKLGFTGRNGRGKTTFLNLLLGKYEYSGT
ISANVSFEYFPFQVQNKKAMTLDVIEEVYPEYLHWQLVRELNLLKVSEDILYRPFDSLSN
GEQTKVMLAALFLKDNRFLLIDEPTNHLDIHARKLVSNYLRSKSGFILVSHDRSFLDNCV
DHILSINKNNIEIQRGNFSAWWENKQRQDQFELASNEKLIKDIKRLSDSAKRTGGWSHEV
ERTKNGTRNSGSKVDKGYIGHKAAKMMKRSKNIEQRQQSAIQEKSKLLKNIESAERLQIH
QLDFHKKELVELEHVSIAYGSNTVCKDVSFTVEKGDRIALYGKNGSGKSSILKLICGEDI
PYTGHFRKDHQLKISYVSQDTSDLSGQLSDYAVTQGIDESLFKSILRKLDFSRLQLEKDI
STFSAGQKKKVLIAKSLSEQAHLHIWDEPLNFVDVISRMQIEDLLLEYSPTLLFVEHDSE
FCSNIATRIIEL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaattaacgttagcaacctaacctttgcctatgatggcagttacgataatata
tttgaaaatgtgagttttcagctggactccgattggaaattgggctttaccggaagaaac
ggcagaggcaaaacgacattcctcaacctgctgcttggtaaatatgaatacagtggaact
atttctgcgaatgtcagctttgagtactttccttttcaggttcagaataaaaaagctatg
accctcgatgtcattgaagaggtctatcctgaatatttgcactggcagcttgtcagagag
cttaacctgttaaaggtttcggaagatattctgtatcggcctttcgactctttatcaaat
ggcgaacaaacgaaggtcatgctggctgccttgttcctgaaggataatcgatttttgctc
attgatgaacctactaatcatctcgatattcatgcgagaaaactcgtcagtaattatctt
cgcagcaaaagtggatttattctggtgtcgcatgatcgatcctttctggataactgcgta
gaccacatcctgtccattaataaaaataacatcgagattcagagagggaatttctccgct
tggtgggaaaataaacaaaggcaagatcagtttgaacttgcaagtaatgagaagttaata
aaggacatcaagcgtttgtccgattctgccaaacggacgggtggatggtcgcatgaagtg
gaaagaaccaaaaatggtacgagaaattccggttcaaaggtggataaaggctatatcgga
cacaaggctgccaaaatgatgaaacgttctaaaaatattgagcagagacagcaatccgcc
atccaagaaaagtccaaacttctaaaaaatattgagagtgctgaacgtctacagattcat
caactggattttcacaaaaaagaacttgtcgaattggaacatgtatcgattgcatatggc
tccaatacggtatgtaaggacgtgagtttcacagttgaaaagggggatcggattgcactc
tatggtaaaaacggatcggggaaatcaagcatccttaaactgatctgtggtgaggacatc
ccttatacaggtcattttcgaaaggatcaccaacttaagatctcgtatgtgtcgcaggac
acgtctgatctcagcggccaattatcggattatgctgtcacacagggaatcgatgaaagc
ttgtttaaatcgatcctaagaaagctggatttttccaggctgcaattggagaaggatatc
tcgacgtttagcgcaggccaaaaaaagaaggtgctgattgctaaaagtctcagtgagcaa
gctcatttgcatatttgggatgaacctctcaactttgttgatgtcatctctcgtatgcaa
attgaagacttgctgctggagtactccccgacccttttgtttgtagagcatgacagtgag
ttttgctcaaatatagcaacaagaattatcgagctatga
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