Paenibacillus sp. E222: HW560_26710
Help
Entry
HW560_26710 CDS
T10443
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pezz Paenibacillus sp. E222
Pathway
pezz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pezz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HW560_26710 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pezz03019
]
HW560_26710 (pnp)
03016 Transfer RNA biogenesis [BR:
pezz03016
]
HW560_26710 (pnp)
Enzymes [BR:
pezz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HW560_26710 (pnp)
Messenger RNA biogenesis [BR:
pezz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HW560_26710 (pnp)
Transfer RNA biogenesis [BR:
pezz03016
]
Prokaryotic type
tRNA degradation factors
HW560_26710 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
SPATA25
OB_RRP5_4th
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
QLG41347
LinkDB
All DBs
Position
complement(6030266..6032368)
Genome browser
AA seq
700 aa
AA seq
DB search
MEQRVEMQLGGRTLTLETGRLAKQANAAVKVTYGDTVVLCTVTASSEPKDLDFFPLTVNY
EERLYAVGKIPGGFIKREGRPSEKAILSSRLTDRPIRPLFPEGFRNDVQVLNIVMSVDQD
CEPQIAAMIGTSAALSISDVPFSGPIGGVKVGRINGEFIINPTIAQLEVSEIELVVAGTK
DAIMMVEAEANEVPEEIMLEAIMFGHDEIKNIVAVIEQLVQVAGKEKMAVKLHAVNAEVN
SSVREFASARLVEAVKIAEKHARQDAIDAVNDETVAHFEEKYIETPELLKDVKEVLHDIV
KEEVRRLITHDKVRPDGRGLAEIRPIECDTSLLPRTHGSGLFTRGQTQALSVCTLGALGD
VQILDGISLEETKRFMHHYNFPPFSVGEARPLRAPGRREIGHGALGERALSKVIPSETDF
PYTIRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGVAMGLIKDGDHVSILSDI
QGMEDHLGDMDFKVAGTPDGVTAIQMDIKIDGIDRQILSEALAQAKEGRMHILSKMTEVM
KTPREQLSQYAPKITTMHINPDKIRDVIGAGGKIINKIIEETGVKIDIEQDGRVFIASSN
QEMNDKAKSIIEGIVREVLVGEIYVGKVKRVEKFGAFVEVLPNKEGLVHISQLSTERVAK
VEDVVAIGDSITVKVTEIDPQGRINLSRKAVLTAEAPAQS
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggaacagcgtgttgaaatgcagcttggtggaagaacgcttacgcttgaaacagggcgt
ttggccaagcaggctaatgctgccgttaaggtaacgtacggggataccgttgtattgtgt
accgtgacagcatcaagtgagcctaaagatctggactttttcccattaacggtaaactat
gaagaaagattgtatgccgtaggtaaaatcccaggtggatttattaaacgtgaaggcaga
ccaagtgagaaagcaattctttcgagccgtttgacagaccgtccaatccgtcctttgttc
ccggaaggtttccggaatgatgtacaagtacttaatatcgttatgagtgtggatcaggac
tgcgaaccgcaaattgctgccatgatcggtacatcggctgcactgagcatttcggatgtt
ccatttagcggaccgattggtggcgtgaaagttggacgtattaatggtgagttcatcatt
aacccaacgattgcacagcttgaggtaagtgagattgaactggttgttgcaggaaccaaa
gatgccatcatgatggttgaagcggaagcgaacgaagttccggaagaaatcatgcttgaa
gcaatcatgttcggacatgacgagatcaagaacattgttgcagtcattgaacaactcgta
caagtggctggtaaagaaaaaatggctgtgaaattgcatgccgttaatgctgaagtgaac
agcagtgtacgtgagttcgccagtgctcgtctggttgaagcggttaaaattgctgagaaa
catgcgcgtcaggatgcaatcgatgccgtgaatgacgaaaccgttgctcacttcgaagag
aagtatattgagactccagaactgctcaaagatgtgaaagaagtgctgcacgatatcgtt
aaagaagaagtgcgtcgtcttatcacacatgataaagttcgtccggatggacgtggactc
gctgagatccgtccaattgaatgtgatacttccctgctgccacgtactcacggttcaggt
ctgttcactcgtggacaaacacaggcgctcagcgtttgtactcttggtgcactgggtgat
gttcagattttggacggaatcagtcttgaagaaacgaaacgtttcatgcatcactacaac
ttcccaccgttcagcgtaggtgaagctcgtccattgcgtgctccaggtcgtcgcgaaatc
ggacatggtgctctgggtgagcgtgctctttccaaagtaattccttccgaaacagacttc
ccatacacgattcgtctggtatccgaagtattggaatcgaacggttcaacttcccaggca
agtatctgtgccagcacattggctatgatggatgcaggtgtaccaattaaagctccagta
gctggtgtagctatgggtctgattaaagacggagatcatgtatccatcctgagcgatatt
caaggtatggaagatcacctcggtgacatggacttcaaagtagcaggaacacctgatggt
gtaacagctattcaaatggacatcaaaattgatggtattgatcgtcaaattttgtccgaa
gcattggctcaagccaaagaaggtcgtatgcacatcttgagcaaaatgaccgaagtgatg
aaaactccacgtgagcagttgtcacaatatgcgcctaaaattacaaccatgcatatcaat
ccggacaaaatccgtgatgttatcggtgcaggtggtaaaattatcaacaaaatcatcgag
gaaaccggtgttaaaattgatattgaacaggatggacgtgtctttatcgcctcttcaaac
caagagatgaatgataaagccaaatcgatcatcgagggcattgtgcgtgaagtactggtc
ggcgagatctatgtaggtaaagtaaaacgtgttgagaagtttggtgctttcgttgaggtg
ctgccgaacaaagaaggtctggtacacatctcacaattgtctacagagcgtgttgctaaa
gtggaggatgttgttgccattggtgattccattacggtaaaagtaacggaaattgaccct
caaggccgtatcaacttgtcccgcaaagccgtattaactgctgaagctccggctcaatca
tag
DBGET
integrated database retrieval system
