Paenibacillus sp. E222: HW560_27130
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Entry
HW560_27130 CDS
T10443
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
pezz Paenibacillus sp. E222
Pathway
pezz02024
Quorum sensing
pezz03060
Protein export
pezz03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pezz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HW560_27130 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HW560_27130 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HW560_27130 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pezz02044
]
HW560_27130 (ffh)
Enzymes [BR:
pezz01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
HW560_27130 (ffh)
Secretion system [BR:
pezz02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HW560_27130 (ffh)
Eukaryotic Sec-SRP protein
HW560_27130 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
Zeta_toxin
CbiA
AAA_17
AAA_30
APS_kinase
cobW
AAA_31
AAA_33
6PF2K
CLP1_P
AAA_18
TPP_enzyme_M
NPR1_interact
AAA_16
ResIII
NPHP3_N
MMR_HSR1
TsaE
RelE
Thymidylate_kin
Motif
Other DBs
NCBI-ProteinID:
QLG41429
LinkDB
All DBs
Position
complement(6114385..6115761)
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AA seq
458 aa
AA seq
DB search
MAFEGLTTRLQNVFSKLRGKGKVSDEDVAEAMREVRLALLEADVNFKVVKEFIAKVKEKA
VGKEVMESFTPGMVIIDIVNKELTDLMGGSQSKLAKANKPPTVLMMVGLQGAGKTTTSGK
LAKMLQKQNSRPLLVAGDIYRPAAIKQLQVLGEQIKAPVFTLGDQTSPVEIARQGLQHAK
DNGNDYVIIDTAGRLHVDEELMEELRQIHSVVNPDEVLLVVDSMTGQDAVNVAEHFNQQL
DLTGVVLTKLDGDTRGGAALSVKAVTGCPIKFASLGEKLDALEPFHPERMASRILGMGDM
LSLIEKAQSNIDTEKAKEMERKMRNAEFTFEDFLEQMDQVKKLGPIDQIMDMIPGMGKMK
QAKDLKVDDKQMGRIEAIVYSMTTEEKRNPDMINHSRRKRIATGSGTSLAEVNRLIKQFD
EMRRMMKQFSDMMGPKGGKNKAMKQLKGLGKGMKFPFR
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcatttgaaggattaacgacccgattgcagaatgtgttcagcaagctgcgcggcaaa
ggcaaggtgtctgatgaagatgttgccgaagcgatgcgcgaggtacgtctggcattgctc
gaagcggatgtaaacttcaaagtggtcaaggaattcatcgccaaggtgaaagagaaggct
gtcggcaaagaagtgatggagagcttcacgcccggaatggtcattatcgacatcgtaaac
aaggaactgacggatttgatgggtggaagccagtcgaagctggccaaagccaacaaaccg
cctacggtattgatgatggttggtttgcagggtgcgggtaaaacgaccacatccggtaaa
ctggccaaaatgctgcaaaagcaaaatagcagaccgttacttgttgcaggagatatttat
cgtccagcagcgatcaagcagttgcaagtgctcggcgagcagatcaaagcgccagtattt
acactgggagatcagacaagccctgtagagatcgcacgtcagggtctgcagcatgccaag
gataacggtaatgactacgtcattatcgatacagctggacgtctgcatgtcgatgaagaa
ctgatggaagagcttcgtcagattcacagcgtagtgaacccggatgaagtactgcttgtc
gtagacagcatgacgggtcaggatgcagttaatgtggcagaacactttaaccagcagctt
gatctgaccggggtggttctgactaagcttgatggagatactcgtggtggtgccgcgctt
tcggttaaagcagtcaccggttgtccgattaagtttgcttctcttggagagaaactggac
gcacttgagcctttccatccagaacgtatggcttcacgtattcttggtatgggtgacatg
ctctctctgattgagaaggcacagtccaacattgataccgaaaaagccaaggaaatggaa
cggaagatgcgtaatgcagaattcacgttcgaagatttcctggagcaaatggaccaagtg
aaaaagctggggccaattgatcagatcatggatatgattcctggtatgggcaagatgaaa
caagccaaggacctgaaggttgatgataaacagatgggccggatcgaagcgatcgtgtac
tccatgacgaccgaagagaaacgtaacccggatatgatcaaccatagccgtcggaagcgg
attgctacaggtagtggaacatccctggccgaagtaaaccgtctgatcaagcagtttgat
gagatgcgccgcatgatgaaacagttctcagatatgatgggacctaaaggcggcaagaac
aaagcgatgaagcagctcaaaggtttgggcaaaggaatgaagtttcctttccgttga
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