Paenibacillus sp. E222: HW560_27155
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Entry
HW560_27155 CDS
T10443
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pezz Paenibacillus sp. E222
Brite
KEGG Orthology (KO) [BR:
pezz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HW560_27155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pezz03019
]
HW560_27155
03009 Ribosome biogenesis [BR:
pezz03009
]
HW560_27155
03036 Chromosome and associated proteins [BR:
pezz03036
]
HW560_27155
Enzymes [BR:
pezz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
HW560_27155
Messenger RNA biogenesis [BR:
pezz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HW560_27155
Ribosome biogenesis [BR:
pezz03009
]
Eukaryotic type
90S particles
RNase
HW560_27155
Prokaryotic type
rRNA processing factors
HW560_27155
Chromosome and associated proteins [BR:
pezz03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
HW560_27155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
Lzipper-MIP1
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
QLG41434
LinkDB
All DBs
Position
complement(6122079..6122777)
Genome browser
AA seq
232 aa
AA seq
DB search
MSEDLKQLQHKLQIKFDNRQLLKQAFTHASYVNEHRFSQHQDNERLEFLGDAVLELTVSE
YLYHLFPNRPEGELTKLRASIVCEPSLVKFAEALGFGQYVLLGKGEELTGGRTRPALLAD
VFESFIGALYLDQGLAPVRTFLDQHVFPLIVLGSKLQMSDYKTELQELTQHHNMGALEYR
IVEERGPAHEREFVSEVHMGQERLGRGTGRSKKEAEQQAASAALDRLKLPEA
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgaagatctgaagcagttacaacacaaacttcaaatcaaatttgacaacaggcag
cttttaaaacaagcgtttacccatgcttcttatgtaaacgaacaccggttcagtcagcat
caggataacgagcgtctggagtttctgggcgatgcggtactggaactgactgtgtcggaa
tacttgtatcacttgtttcctaaccggccggaaggtgaattaactaagctgcgggcatcc
attgtctgcgagccttccctcgtcaaatttgctgaagcgttgggttttgggcagtatgta
cttcttggtaaaggtgaggaactgacgggaggacgaactagaccggctttgctagcggat
gtgtttgaatctttcatcggtgcattatatctggatcagggattggcgcctgtccggaca
tttctggatcagcatgtatttccgttaattgttctgggcagcaagctgcaaatgagcgat
tacaaaacggaattgcaggaactcactcagcatcacaatatgggagctctggaataccgt
attgttgaggaacggggccctgcccatgaacgggagtttgtctccgaggtccatatgggt
caagaacggcttggcagaggtacaggacgttccaaaaaggaagccgagcaacaggctgca
tccgcagcactggatcgactgaagcttccggaagcctga
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