KEGG   Paenibacillus sp. E222: HW560_27950
Entry
HW560_27950       CDS       T10443                                 
Name
(GenBank) 3'-5' exoribonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pezz  Paenibacillus sp. E222
Pathway
pezz03030  DNA replication
pezz03430  Mismatch repair
pezz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pezz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HW560_27950
   03430 Mismatch repair
    HW560_27950
   03440 Homologous recombination
    HW560_27950
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pezz03032]
    HW560_27950
   03400 DNA repair and recombination proteins [BR:pezz03400]
    HW560_27950
Enzymes [BR:pezz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HW560_27950
DNA replication proteins [BR:pezz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HW560_27950
DNA repair and recombination proteins [BR:pezz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HW560_27950
SSDB
Motif
Pfam: RNase_T Rv2179c-like DEDDh_C RNase_H_2
Other DBs
NCBI-ProteinID: QLG41578
LinkDB
Position
complement(6327393..6328130)
AA seq 245 aa
MREPARGNTGFWNSLRQGGVPSAIASIMGAPTAQHMAFIRSMMREQRRPEALHTPLNELN
AVVFDLETTGFSPQHGDEILSFGAVRINGGVMLENEQFYTLVQSKVSVPEHITELTGITQ
QMTMDAPSLLEGLHDFMSFVGGSVLVAHASAHDRAFLNAALWRTSKVRLTHRLIDTMMLA
RWLEPSRPGYGLDELLESKGIPIYGRHHALEDAKMTAQLWSCYLEDMSHKNVETLGDLYT
QLSHA
NT seq 738 nt   +upstreamnt  +downstreamnt
atgagagagccggcaaggggcaatacaggattctggaattcgctgcgccagggaggggtt
ccttccgccatcgcttccataatgggagccccaacggcgcaacatatggcgtttatccgt
tcgatgatgagagaacagcgcagacccgaggcgcttcacacgcctttaaacgaattgaat
gctgtcgtatttgatctggaaacgacgggcttctctccccagcatggggatgagatcctt
tcctttggggcggtgcgtattaatggtggtgtgatgctggagaatgagcagttctacaca
ttggttcagtccaaagtctctgttccggaacacattacggaactgacgggaattacacag
caaatgacgatggatgctccgtcgctcctggaaggtctgcatgacttcatgtcttttgtt
ggcggaagtgtactggttgcccatgcaagcgcgcatgatcgggcttttctgaatgcggcc
ttgtggcggacatccaaagtaaggctaacgcaccggctcatcgatacgatgatgctggcg
cgttggcttgaaccgagcagaccgggctatggtctggatgaattgctggaatccaaaggc
attccgatctacggacggcaccatgctttggaggacgcaaaaatgactgcacagttatgg
tcctgttatctggaggatatgtctcacaaaaatgtagaaacattgggtgacctgtacacc
cagttaagtcacgcttag

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