Paenibacillus sp. E222: HW560_28005
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Entry
HW560_28005 CDS
T10443
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pezz Paenibacillus sp. E222
Pathway
pezz03018
RNA degradation
Brite
Enzymes [BR:
pezz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HW560_28005
Messenger RNA biogenesis [BR:
pezz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HW560_28005
Ribosome biogenesis [BR:
pezz03009
]
Prokaryotic type
rRNA helicases
HW560_28005
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QLG41586
LinkDB
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Position
complement(6336375..6337958)
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AA seq
527 aa
AA seq
DB search
MTNLNFTDFNLEPLVLQAITELGFEEATPIQSKSIPLALEGRDLIGQAQTGTGKTAAFGI
PLISKISKSDEKIRALIMAPTRELAIQVAEEIEKLTRFKGLRSLPIYGGQDIVRQIRALK
RKPQIIIGTPGRLLDHINRKTIKLDDVQTVVLDEADEMLDMGFMEDIQSILKQVPDERQT
MLFSATMPPNIQKLAQQFLNNPEHVSVIPKQVSAPLIDQAYIEVPERQKFEALSRLLDME
SPELAIVFGRTKRRVDELAEALQKRGYSADGLHGDLSQNQRDTVMRKFRDGSIDVLVATD
VAARGLDVSGVTHVVNFDLPQDPESYVHRIGRTGRAGKEGAAWSFVTPREIDHLHFIERV
TRHRIPRKPLPTMAEAVEGKQRLTAERLLEIVQSGELNEYKGIAIQMLEQYDSVQLLSAA
LKLLTGDKKDAQVDLTPEDPIRAKRRKPDVRSGGRKPSGYSGNRSSGGGGGYNRDRNSSG
GGRGGYNRDRNSSGSGSGSREGGYNRDRKPRPSNNEGRRPAKDSSFE
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
ttgacaaatttaaatttcacagatttcaatcttgaaccactggtgctgcaagcaatcacc
gaacttggttttgaagaggccactccgattcaatccaaatcaatccctcttgctctagaa
ggcagagacttgatcggtcaagctcaaacgggtactggtaaaaccgctgcatttggtatt
ccattgatcagcaaaatctccaaaagtgatgaaaaaatccgcgccctcattatggcacct
acacgtgagcttgcgatccaagttgccgaagaaatcgaaaaactcacccgcttcaaaggt
ttgcgctccctgccaatttacggaggacaagacatcgttcgtcaaatccgtgcactgaaa
agaaaaccacagatcatcattggtacaccaggacgtctcctggaccacatcaaccgcaaa
acaatcaaacttgatgatgtacaaactgttgtattggatgaagcagatgaaatgcttgat
atgggcttcatggaagatatccaatccatcctgaaacaagttccagacgagcgtcaaaca
atgctgttctcagcaacaatgcctcctaacattcaaaaattggctcaacaattcttgaac
aaccctgagcacgtttccgtgatccctaaacaagtaagcgcacctttgattgaccaagct
tacattgaagtgccagagcgtcaaaaattcgaagcactcagccgtttgctggatatggaa
tctcctgaactggcgattgtattcggacgtactaaacgtcgtgttgacgaattggctgaa
gctctgcaaaaacgtggatattctgctgacggtctgcatggtgacttgtcgcaaaaccaa
cgtgatacagtaatgcgtaagttccgtgacggcagcattgatgttctcgttgcaacagac
gtagctgcacgtggtctcgacgtatccggcgtaactcacgttgtgaactttgaccttccg
caagatccggaaagttatgttcaccgtatcggccgtacaggtcgtgcgggtaaagagggc
gctgcatggtctttcgttactccgcgtgagatcgaccacctgcactttatcgagcgtgta
acacgtcaccgtattccgcgcaaaccgctgccaactatggctgaggctgtagaaggaaaa
caacgtttgacagctgagcgtttgctcgaaatcgtacaatctggtgaactgaacgaatac
aaaggtatcgcgattcaaatgctggagcaatatgattctgttcaactgttgtcggctgct
ctgaagctcctgacaggtgacaaaaaagatgctcaggttgatctgactcctgaagatcca
attcgtgcaaaacgtcgtaaaccggatgttcgctctggcggacgcaaaccatctggttac
agcggcaaccgcagcagtggtggtggcggtggatacaaccgtgatcgcaacagcagtggc
ggcggacgtggtggatacaaccgcgatcgtaacagcagtggtagtggaagtggaagcaga
gaaggtggttacaaccgtgaccgcaaaccgcgtccaagcaacaacgaaggacgtcgtcct
gcgaaagattcttctttcgaataa
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