Paenibacillus sp. E222: HW560_28520
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Entry
HW560_28520 CDS
T10443
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pezz Paenibacillus sp. E222
Pathway
pezz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pezz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HW560_28520 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pezz03400
]
HW560_28520 (mutM)
Enzymes [BR:
pezz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
HW560_28520 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HW560_28520 (mutM)
DNA repair and recombination proteins [BR:
pezz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HW560_28520 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
QLG41673
LinkDB
All DBs
Position
complement(6444066..6444896)
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AA seq
276 aa
AA seq
DB search
MPELPEVETVRRTLNQLIVGKTIDSVTVSLPRIIQRPDDIDAFAMELKGHTVIGVERRGK
FLRILLDGLVLVSHLRMEGRYGVYQQHEEVEKHTHVIFHFTDGTELRYKDVRQFGTMHLF
NAGEELVSKPLLKLGLEPLDPVFTVAAFREAVGKRTTKIKAVLLNQAYVVGIGNIYVDEA
LFRAGIHPETIAKTLTETQLTVLHEAIVITLQDAVDAGGSSIKSYVNGQGEMGMFQHQLK
IYGRKAEPCATCGTLIEKIVVGGRGTHYCPKCQPLL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattaccggaagtcgaaacagtcagaagaacattgaatcaacttattgttggc
aagaccattgactcagttaccgttagcttgccgcggatcattcagcggccggacgacata
gatgcatttgcaatggaacttaagggacataccgtgattggtgtagagcgcaggggcaag
tttttgcgtattttgctggacgggctggtgcttgtctcccatctgcggatggaaggaaga
tacggggtgtaccaacaacatgaggaagtggagaagcatacccatgtcatttttcacttt
accgatggtacagaattacgttacaaggatgtccgtcaattcggtacaatgcatctcttt
aatgcaggtgaggaactggtatccaaacctttgttaaagctggggctggaaccacttgat
ccagtgtttaccgtagctgcattccgtgaggctgttggcaaacggacaaccaaaattaaa
gccgtgttgttaaatcaggcatatgtggtcggcatcgggaatatttatgtggacgaggcc
ttgttccgcgctggcattcatccagagaccattgccaagacattgaccgaaacccagtta
accgtgctacatgaagcgatcgtgattacgctgcaggatgcggtggatgcaggtggttcg
tccattaagtcctatgtcaatggacagggtgagatgggcatgttccagcatcaattgaaa
atatatggacgcaaagctgaaccctgtgcgacttgtggcacattaatcgagaagattgta
gtgggcggtagaggcacgcattactgtccgaagtgtcaaccgctgctctaa
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