Plasmodium falciparum 3D7: PF3D7_0209800
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Entry
PF3D7_0209800 CDS
T00095
Name
(RefSeq) ATP-dependent RNA helicase UAP56
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
pfa
Plasmodium falciparum 3D7
Pathway
pfa03013
Nucleocytoplasmic transport
pfa03015
mRNA surveillance pathway
pfa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PF3D7_0209800
09122 Translation
03013 Nucleocytoplasmic transport
PF3D7_0209800
03015 mRNA surveillance pathway
PF3D7_0209800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfa03019
]
PF3D7_0209800
03041 Spliceosome [BR:
pfa03041
]
PF3D7_0209800
Enzymes [BR:
pfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PF3D7_0209800
Messenger RNA biogenesis [BR:
pfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
PF3D7_0209800
Spliceosome [BR:
pfa03041
]
Complex C
Other components
EJC/TREX
PF3D7_0209800
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
PF3D7_0209800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
812689
NCBI-ProteinID:
XP_001349607
PlasmoDB:
PF3D7_0209800
UniProt:
Q9TY94
LinkDB
All DBs
Position
2:complement(join(404281..405380,406082..406355))
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AA seq
457 aa
AA seq
DB search
MASMDHNAQDELVDYEDDENILDSKDVKGNLGNNILNNNNKGGAMRGSYATVHTGGFKDF
FLKPELLRAISESGFEHPSEVQQETIPAAITGTDILCQAKSGMGKTAVFVLSILQQLDTN
ENQDMQDTKEMNNDNNNNGDNKFVRCLGLAHTRELAYQIKNEFDRFSKYLKNVRCEVVYG
GISMNKHIKLFKEDNIPHIIIGTPGRILALIREKYLITDKIQHFVLDECDKCLEKLDMRS
DVQKIFISTPLKKQVMFFSATMAKEMRDVCKKFLQNPVEIFIDDEAKLKLHGLLQHYVKL
QEKDKTRKLIEILDALEFNQVIIFVKSVTRAITLDKLLTECNFPSIAIHGGLEQQERIER
YDKFKKFENRILVSTDLFGRGIDIERVNIVINYDMPENSDSYLHRVGRAGRFGTKGLAVT
FVSSQEDTLALNEVQTRFEVAISEMPNKIDCNEYINQ
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaatggatcataatgctcaagatgaattagtagattatgaagatgatgagaat
atattagatagtaaagatgttaaagggaatttaggaaataatattttaaataataataat
aagggtggagctatgagaggtagttatgcaactgtgcatacaggaggatttaaagatttt
tttttaaaaccagaattattaagagcaataagtgaaagtggttttgagcatccttcagag
gtacagcaagaaactattcccgcagcaattacaggaactgatatcctttgtcaggccaag
agtggtatgggaaaaacagccgtttttgttttatccattttacaacagctagatacgaat
gaaaatcaagatatgcaggacacgaaagaaatgaataatgacaacaataataatggagac
aataaatttgttaggtgtcttggtttagcacatactcgagagttggcctatcaaataaag
aatgaattcgataggtttagtaaatatttaaaaaatgtaagatgtgaagttgtatatgga
ggtatatcaatgaataagcatataaaattatttaaagaagataatattccacatattatt
ataggaacaccaggaagaatattagccttgataagagagaagtatttaattacagataaa
attcaacattttgtattagatgaatgtgataaatgtttagaaaaattagatatgagaagt
gatgttcagaaaatttttatatcaacacctttaaaaaaacaagttatgtttttttcagca
actatggctaaagaaatgagagatgtgtgtaaaaagtttttacaaaatccagtggaaatt
tttattgatgatgaagcaaaattaaaattacacggattattacaacattatgttaaatta
caagaaaaagataaaacaaggaaacttatcgaaatattagatgctttagaattcaaccaa
gttattatctttgttaaatcagttacaagagctatcacattagataaattattaacagaa
tgtaatttcccatccatagctatccatggaggtcttgaacaacaagaaagaatagaaaga
tatgataaatttaaaaaattcgaaaatagaatcctagtatcaacagatctattcggaaga
ggtatcgatattgaaagagttaatattgttatcaattatgatatgccagaaaattcagac
tcttatttacatagagtaggacgtgctggaagatttggtaccaaaggtctagccgttact
tttgtttcttcacaagaagatactttggcattgaatgaagtccaaacaagatttgaagtt
gccatctcagaaatgccaaataaaattgattgtaatgagtacatcaatcaataa
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