Plasmodium falciparum 3D7: PF3D7_0308600
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Entry
PF3D7_0308600 CDS
T00095
Name
(RefSeq) pre-mRNA-processing factor 19, putative
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
pfa
Plasmodium falciparum 3D7
Pathway
pfa03040
Spliceosome
pfa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PF3D7_0308600
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
PF3D7_0308600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfa03041
]
PF3D7_0308600
04121 Ubiquitin system [BR:
pfa04121
]
PF3D7_0308600
03400 DNA repair and recombination proteins [BR:
pfa03400
]
PF3D7_0308600
Enzymes [BR:
pfa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
PF3D7_0308600
Spliceosome [BR:
pfa03041
]
Complex B
Other components
Prp19 complex
PF3D7_0308600
Complex C
Prp19-CDC5 complex
PF3D7_0308600
Ubiquitin system [BR:
pfa04121
]
Ubiquitin ligases (E3)
U-box type E3
PF3D7_0308600
DNA repair and recombination proteins [BR:
pfa03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
PF3D7_0308600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR41
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
DUF7165
TBCA
Beta-prop_Aladin
Tricorn_2nd
WDR90_beta-prop_4th
RNase_H_2
Snf7
Beta-prop_DCAF4
zf-Nse
U-box
GED
IglE_N
WDR54
bZIP_1
Motif
Other DBs
NCBI-GeneID:
814402
NCBI-ProteinID:
XP_001351160
PlasmoDB:
PF3D7_0308600
UniProt:
O77325
LinkDB
All DBs
Position
3:372632..374230
Genome browser
AA seq
532 aa
AA seq
DB search
MSIICTISGQTPEEPVISKTGYIFEKRLIEKHIINYGICPVSGEVLTLEDLYPIKNEKIV
KPRPITASSIPGLLSIFQTEWDSIISEMFSLRTHVNDIRNELSHSLYQYDAATRVIAKLL
KEKNGYKEEIENLKKQIFQLKSSNDLDIYEIGLNEELLEKMQNVAKDLLINRKKRKIDNV
CSVEQWKDFKNTNEFNIHSSTIPGVTCITLDVNKYKYNYNDDHMKHNFFSGGNDGNVYYV
SLNDNKILSKLQGHLKKVNSIISHPSNFICITASNDKTIRIWKGDDNNVHHNDNGDSDSD
NNNNNNDNDGSHLNNNEYIYDNYQFVSAHVITKHKDHVTSLALHPLENYFISSSKDSMWI
LHDLETAKTIKTSKDNPSSFKHLAIHPDGMMFGIAAQDSNIHIYDIKSQEYKATLNGHTK
SLNCLSFSENGYYLASSSKDNTVKLWDLRKAQSFQTITLNETPNFISFDYSGKYLSIAVE
NDIQIYNFETKNQANLIKTLSSHTDIVTQTCFGSTTSYILSSSMDKTIKLWN
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgtcaataatatgcaccataagtggccagacacctgaagaacctgttataagtaaaacg
ggatatatttttgagaaaagattaattgagaaacacataattaattatggtatatgtcct
gtaagtggtgaagttttaacactagaagatttatatccaataaaaaatgaaaagatagtc
aaacctagacctattacggctagtagtattcctggattattatccatttttcaaaccgaa
tgggattcgattatatcagaaatgtttagcctaagaacacatgttaatgatatacgtaat
gaattaagccatagcttgtatcaatatgatgctgctactagggttatagctaaattatta
aaagagaaaaatggttataaagaagaaatagaaaatttaaaaaaacaaattttccaatta
aaaagtagtaatgatctcgatatttatgaaataggattaaatgaagaattattagaaaaa
atgcaaaatgttgcaaaagatttattaattaatagaaaaaaaagaaaaatagataatgta
tgttctgttgaacaatggaaagatttcaaaaatactaatgaatttaatattcactcatca
accataccaggagtaacatgtattacattagatgttaataaatataaatataattataat
gatgatcatatgaaacataatttcttctcaggaggtaatgatggaaatgtttattatgtt
tcgctaaacgataataaaatcttatcaaaattacaaggacatttaaaaaaagtaaactca
attatttcacacccctccaattttatatgtataacagcatctaacgataaaactataaga
atatggaaaggtgacgacaataatgtacatcataatgataatggcgacagtgatagtgat
aataataataataataacgataatgatggtagtcatcttaataataatgaatatatatat
gataactaccaatttgtctctgcgcatgttataaccaaacataaagatcatgttacttca
ttagctttacatcctttggaaaattattttattagctcttccaaagacagtatgtggatt
ctacatgatctagaaactgccaaaactataaaaacgtcaaaagataatccaagctctttt
aaacatctagccatacacccagatggtatgatgtttggtatagcagcacaagattctaat
atacatatctatgatattaaaagtcaagaatataaagcaacattaaatggacataccaaa
tctttaaattgtttatcctttagtgaaaacggttattatttagcatcatcttcaaaagac
aatacagtcaaattgtgggacttgagaaaagctcaaagttttcaaactataacgttaaat
gaaacacccaattttatttcttttgattattcaggaaagtatctatccatagctgtagaa
aatgatatacaaatatataattttgaaaccaaaaatcaagccaatctaataaaaacatta
tcctcccatacagatatagttacgcaaacatgctttggtagtaccacctcatatatattg
tcaagttcaatggataaaacaataaaactttggaattaa
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