Plasmodium falciparum 3D7: PF3D7_0320800
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Entry
PF3D7_0320800 CDS
T00095
Name
(RefSeq) ATP-dependent RNA helicase DDX6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
pfa
Plasmodium falciparum 3D7
Pathway
pfa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PF3D7_0320800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfa03019
]
PF3D7_0320800
03036 Chromosome and associated proteins [BR:
pfa03036
]
PF3D7_0320800
Enzymes [BR:
pfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PF3D7_0320800
Messenger RNA biogenesis [BR:
pfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
PF3D7_0320800
mRNA degradation factors
5'-3' decay
Decapping complex
PF3D7_0320800
Chromosome and associated proteins [BR:
pfa03036
]
Eukaryotic type
Gene silencing
piRNA pathway
PF3D7_0320800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Arcadin_1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
814522
NCBI-ProteinID:
XP_001351278
PlasmoDB:
PF3D7_0320800
UniProt:
O97285
LinkDB
All DBs
Position
3:join(870817..871207,871432..872342)
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AA seq
433 aa
AA seq
DB search
MSYKTNCTNSNANTNTLNSSSNYNKIDDNIILDEEWKKKILEPLKDLRYKTEDVTKTKGN
EFEDYFLKRELLMGIFEKGYEKPSPIQEESIPVALAGKNILARAKNGTGKTAAFAIPLLE
KCNTHKNFIQGLILVPTRELALQTSAMIKELGKHMKVQCMVTTGGTSLREDIMRLYNVVH
ILCGTPGRILDLANKDVANLSGCHIMVMDEADKLLSPEFQPIVEELMKFLPKEKQILMYS
ATFPVTVKEFRAIYLSDAHEINLMDELTLKGITQYYAFVKERQKVHCLNTLFAKLQINQA
IIFCNSITRVELLAKKITELGYSSFYIHARMSQTHRNRVFHDFRNGACRCLVSSDLFTRG
IDIQSVNVVINFDFPKNSETYLHRIGRSGRYGHLGLAINLITFEDRFNLYKIEVELGTEI
QPIPNEIDPSLYT
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagttataaaaccaattgtacgaactctaatgctaatacaaatactttgaatagttct
tcaaattataacaaaatagatgataatataatattagatgaagaatggaaaaagaaaatt
ctggaaccattaaaagatctaagatataagacagaagatgtaacgaaaacgaaaggcaat
gaatttgaagattattttttgaagagagaattattaatgggtatctttgaaaaaggatat
gagaaaccatcacctatacaagaggaaagtatacctgtagctttggctggaaaaaatatt
ttagcaagggcaaaaaatggtacaggcaaaacagcagcttttgctatacccttactagag
aaatgtaatacccacaaaaattttattcaaggactcattttggtacccacgcgagaactt
gccctacagacctctgctatgattaaggaattaggaaaacacatgaaagtacagtgtatg
gtaacaaccggtggtacatcattaagagaagatataatgaggttgtataatgtagttcat
attttatgtggtactccaggaagaatattagacttagcaaataaggatgtagcaaattta
tcaggttgtcatattatggttatggatgaagcagataaattattatcacctgaatttcaa
cctatagtagaagaactaatgaaatttttaccaaaagaaaagcagatacttatgtattct
gctacctttcctgtgactgtaaaagaatttcgagctatttatttatcagatgcccatgaa
ataaatcttatggatgaattaaccttaaaaggaataacacaatattatgcttttgttaaa
gaaagacaaaaagtacattgtttaaatacattatttgctaaacttcaaattaatcaagct
atcatcttctgtaatagtattactagggtagaactactagccaaaaaaattaccgaacta
ggatatagctctttttacattcatgcaagaatgtcacaaacacatcgtaatcgtgttttt
catgattttagaaatggagcatgcagatgtttagtttcatcagatctattcacaagaggt
atcgacatacagtcagtcaatgttgttatcaattttgatttcccaaagaattctgaaact
tatttacatagaataggaagatcaggaagatacggacatctaggactagctattaatctt
ataacttttgaagatcgttttaatttatataaaatagaagtagaactaggaacggaaata
caaccaataccaaacgaaattgacccatccttatatacctaa
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