Plasmodium falciparum 3D7: PF3D7_0324900
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Entry
PF3D7_0324900 CDS
T00095
Name
(RefSeq) erythrocyte membrane protein 1, PfEMP1
Organism
pfa
Plasmodium falciparum 3D7
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ATS
Duffy_binding
PFEMP
CIDR1_gamma
NTS
YadA_head
Motif
Other DBs
NCBI-GeneID:
814564
NCBI-ProteinID:
XP_001351318
PlasmoDB:
PF3D7_0324900
UniProt:
O97312
LinkDB
All DBs
Position
3:complement(join(1030822..1032105,1033029..1038254))
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AA seq
2169 aa
AA seq
DB search
MGRPKRAPAAKEPDYSSAKDAKELLDMIGQTVHSKVHREDANYRGKLYGLLTQAQFSNKE
RVHINNPCLLDYNYDTNVTSNVIDPCEHKSVERFSEVSGGECDEKKIKGSNGGACAPFRR
LHVCDRNLEQIKPHTITATHNLLVDVCYAAQFEGKSISGYYPRYQTKYKDSGSTICTVLA
RSFADIGDIIRGKDLYEGYDQKDKEQKVKLENKLKDIFKNIYNELTSTNGKKGKKQALQA
RYQDDGSGNYYQLREDWWDANRAKVWYAITCGAGTSDKYFRKTCSNDTSDTNEKCRCVST
DPPTYFDYVPQYLRWFEEWTEEFCRKKKKKLEDVIKKCRYDENNERKYCSRNGFDCKDTI
RAQEKLVKGYDCHKCSVACDDFEPWIKNQKQEFEKQKGKYTKEMQKYANGTTTKETSNGP
INNLYADDFYKKLQEHYPSVDEFLEKLNEQQICKDEPKVKEETISRVDFKNVDAFSYKEY
CDTCPWCGTEKKQDGTLRYKEDVECRNQPTTPLDNTKSTDIQLSFTDKGNPKILEKFKNL
CEENNEKTINWKCHYKEKNVYKDDSDKDYCVLQDGNQNIKDQTIMSFESFFWSWVSRMLN
DSIKWRNQHSKCINNKKETKCIEGCKKTCECFEKWVGQKKTEWRKIKHHFDQQENLKGRD
RNITLKYYLDILFKEKIKEAYGDERESKELEEKLNNIEGSQQAGDTEHSEFAVDVLLKHE
EEIAENCIKYNPEDTCPTSDTGSRARSDHHDPPPVIPRNDFEDEKDKQPEFKDPGRESED
DDDDEDELPPEDEAKEQEEEEKGAGEDEAASEAEASGPKVEVEGKPPCDIVQTLFESTKN
LSDACGLKYGPGGKEKFPNWKCISSGSDTGSTTKQNDSEGSEGGHRSKRHTESSDSTTTS
SGSVCVPPRRRKLYVGELTKWAEEARKSSTSPQPGESGVANASASSTSSPTDATQLLRDA
FIQSAAIETFFLWHKYKAENTRDNKSPLGNGGVAQFFGSYSGSESEEKTPQQWLQSGTIP
TDFLRQMFYTLGDYRDLCVGVKEDVINALKASGDNPTNKLTIQQISEKIKNVIEKSGDTP
SRTPPGQQPSDNDPKSWWKLHAPYIWNGMIYALTYDTNTASGEKKIEKDDAVYKKLWDEA
NNKPKKDNGQQDYTYEKVEIKEEDSGQKASTASQTPSPRASGENKPTTLDSFVKRPTYFR
YLEEWGETFCRERKKRLEKIKVDCEVEENTGARGGTTKQKYSGDGEECSKIVENKDKIFK
DLEKPSCATPCGLYKRWIRRKKDEYNKQKSAYNEQKTKYENGNNKGGGGNGVCGTLQENA
ADFLKKLGPCSKTYNENGVGKTDFDDDKTFKHTKHCDPCPKFNVNCKNCNSSGGGTKVEC
NGRNSGTTTITASDIKNGGDSTEINMLVSDKFTTKFEGDGLKACKNANIFKSIRKDVWKC
VNICGVDVCGLKKGDNNGELDDKQIILVRALIKRWLEYFLEDYNKIKKKLKSCTEKGEGS
PCIKECVDTWITEKRKEWKTIKERYVDKYTKENDGSNDLTTFLQQGPFYSLVEEAKKVVK
CKDEQEKLWGCTGNTTGHAQDKCENGDFITNLISKLQEKISECTSQSSGSDCTLSTENPS
TTLDDEEPLEEVDQNPEDAQKMIPKICGDVIPKEEAKEEGGCTPDIKKEEEKKEEKKKPE
QTAEKPAAETKAKEEKPAQDEAGPPPADPLPAREPFDPTILQTTIPFGVALALGSIAFLF
LKKKTKSPVDLFSVINIPKSDYDIPTKLSPNRYIPYTSGKYRGKRYIYLEGDSGTDSGYT
DHYSDITSSSESEYEELDINDIYAPRAPKYKTLIEVVLEPSGNNTTASGNNTTASGNNTT
ASGKNTPSDTQNDIQNDDIPSSKITDNEWNTLKHDFISQYLQSEQPNDVPNDYSSGDIPL
NTQPNTLYFDKPEEKPFITSIHDRNLYTGEEYSYNINMSTNSMDDIPINSHNNIYSGIDL
INDSLNSNNVDIYDEVLKRKENELFGTNHVKHTNTHNVTKSSNSDPIDNQLDLFHTWLDR
HRDMCEKWNNKEEVLNKLKEEWENETHSGNTHTSDSNKTLNTDVSIQIDMDNPKPINQFT
NMDTILEDLEKYNEPYYDVQDDIYYDVHDHDTSTVDSNNMDVPSKVQIEMDVNTKLVKEK
YPIGDVWDI
NT seq
6510 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgcccgaagcgtgcgcctgccgcaaaagaacctgactatagtagtgccaaagat
gcaaaggaacttttggatatgattggacaaactgtgcactcaaaagtgcatagagaagat
gcaaattatagaggaaaattgtatggacttttgacacaagcacaattttctaataaggag
agagttcacatcaataatccatgcctacttgattataattatgatactaatgttactagt
aacgtaattgatccgtgcgagcacaaatcagtagaacgtttttctgaagtaagtggtggt
gaatgtgatgagaaaaaaataaaaggtagtaatggtggcgcctgcgcgcctttcagacga
ttacatgtatgtgatagaaatttagaacagataaaacctcatacaataacagcaacacat
aacttattggtggatgtgtgttatgcagcacaatttgaaggaaaatcaatttcaggttat
tatccaagatatcaaacaaaatataaggattctggttctacaatatgtactgtattagca
cgaagttttgcagatataggcgatattatcagaggaaaagatctgtatgagggttatgat
caaaaagataaagaacaaaaagttaaattagaaaataagttgaaagatattttcaagaat
atatataatgagttgacgtcgacgaatgggaagaaggggaagaagcaggcgctacaagct
cgctaccaagatgatggatctggaaattattatcaattacgagaagattggtgggatgcg
aatcgcgccaaagtatggtatgctatcacttgtggtgcaggaactagtgataaatatttt
cgaaaaacatgttctaatgacacatcagacactaacgaaaaatgtcgatgtgtcagtacc
gatcctcctacgtattttgactacgtgccgcagtatcttcgctggttcgaggaatggacc
gaagaattttgcaggaaaaagaaaaaaaaattggaagatgttataaagaaatgtcgttat
gatgaaaataatgaacgaaaatattgtagtcgtaatggatttgattgtaaagatacaatt
agagcacaggagaaacttgttaaaggttatgattgtcataaatgttctgtagcctgtgat
gattttgaaccctggataaaaaaccaaaaacaagaatttgaaaaacaaaaaggaaaatat
acaaaagaaatgcaaaaatatgcaaacggaacaacaacaaaagaaacgtcaaatggtcct
attaataatttatatgcagatgatttttataaaaaactgcaagaacattatccatcagtc
gatgaatttttagaaaaattaaatgaacaacaaatatgtaaagatgaacctaaagtaaaa
gaggaaacaataagtcgtgttgatttcaaaaatgtagatgctttttcttataaggaatat
tgcgatacatgtccttggtgtggaactgaaaaaaaacaagatggaacattgagatataaa
gaggatgtggaatgtagaaatcaacctacaacacccttggataatacaaagagtactgat
atacaactaagtttcactgataaaggaaacccaaaaattctagaaaaatttaaaaatctt
tgtgaagaaaataatgagaaaaccataaattggaaatgtcattataaagaaaaaaatgta
tacaaagatgattctgataaggattattgtgtactacaagatggaaaccagaatataaag
gaccaaacaattatgtcgtttgaatcatttttttggagttgggtttcacgaatgttaaat
gattctataaaatggagaaaccaacatagtaagtgtataaataataaaaaagaaactaaa
tgcatagagggatgtaaaaagacttgtgaatgttttgaaaaatgggttggacaaaaaaaa
accgaatggcggaaaattaaacaccattttgatcagcaagaaaatttgaaaggaagggat
cgtaatataacacttaaatattatttggatattttgtttaaagagaaaattaaagaagct
tatggagatgaaagggaatcgaaagaactagaggaaaaattaaataacattgaaggatcg
caacaagcaggagatacagaacattcagaatttgcagttgatgtattattaaaacacgaa
gaagaaattgccgaaaattgtataaaatacaacccagaagatacatgtcccactagtgac
actggaagccgcgcccgctccgaccaccacgacccaccacctgtcatcccacgtaacgac
ttcgaagacgaaaaagacaaacaacccgaattcaaagaccccggtcgcgaatcggaagac
gacgacgacgacgaagacgaactaccaccggaagacgaagccaaagaacaagaggaggag
gagaaaggtgcaggtgaagacgaggcggcgtcggaggcggaggcgtcgggaccaaaagtg
gaagtggaagggaagccgccatgtgatatagtacaaacactatttgagagcaccaaaaat
ttgtccgacgcatgtggtctaaaatacggtccaggcggaaaagaaaaattccccaattgg
aagtgcataagtagtggtagtgacacgggtagtaccactaaacaaaatgatagtgaaggt
agtgagggtggtcatcgtagtaagcgtcataccgaaagtagtgatagtaccaccactagt
agtggtagtgtttgtgtgccacccaggaggcgaaaactatacgtgggagagttaacgaag
tgggcggaggaggccaggaagagttcgacgtcaccacaaccaggtgaaagtggtgttgca
aacgcctcggcgtcgtcgacctcgtcgcctacagacgcgactcagctcctccgcgacgcc
ttcatccaatctgcggcaatagagacgttttttttgtggcataagtataaagcggaaaac
acgagggacaataagtcgccactcggtaacggtggagtagcacaatttttcggcagctac
agtggaagtgaaagtgaggagaaaacccctcaacagtggttacaaagtggtacaatcccc
accgattttttgcgtcaaatgttttatactttaggagattatagagatttatgtgtaggt
gttaaagaagatgtgattaacgcgttaaaagctagtggtgacaacccaactaacaaactc
actatacaacaaatatcggagaaaataaaaaatgttattgaaaaaagtggtgacacacct
agtcgtacacctcctggccaacaacctagtgacaatgaccctaaatcctggtggaaactt
cacgccccttatatttggaatggaatgatatatgctctaacatatgacacaaacacagcg
agtggcgaaaaaaaaatagaaaaggatgatgcagtgtacaagaaactgtgggacgaagcc
aacaacaaacccaaaaaggacaacggccaacaggactacacgtatgaaaaagtggaaatt
aaagaagaagatagtggccaaaaggcctccaccgcctcccaaaccccctccccccgcgct
agtggtgaaaacaaacccaccacccttgactccttcgtcaaacgccccacctacttccgt
taccttgaagaatggggagaaacattttgtagagaaaggaaaaagagattggagaagatt
aaagtggattgtgaggtggaagaaaatactggtgctcgtggtggtacaacaaaacaaaag
tatagtggggatggggaagagtgtagtaaaatagtagaaaataaggataaaatttttaag
gatttagaaaagccgagttgtgcaacaccttgtggattgtataaaaggtggataagaagg
aaaaaggacgaatataataaacaaaaaagtgcatataatgaacaaaaaacaaaatacgaa
aatggaaataataagggtggtggtggtaatggagtttgtggaacactacaggagaacgct
gcagactttttaaaaaagttaggaccatgttctaaaacttataatgagaatggagtgggt
aaaacggattttgatgatgataaaacctttaaacatacaaaacattgtgatccatgtcct
aaatttaacgtaaattgtaaaaattgtaatagtagtggtggtggtacaaaagtggagtgc
aatggtagaaatagtggaacaacgactattactgcaagtgatattaagaatggaggggat
tctactgaaataaatatgcttgtgagtgataaatttacaacgaaatttgaaggtgatggt
ttaaaggcttgtaaaaatgcaaatatttttaaaagtatcagaaaggatgtatggaaatgt
gttaatatttgtggtgtagatgtatgtggtcttaaaaaaggagataataatggtgaatta
gatgataaacaaattatattagttagagcattgattaaaagatggttagaatatttttta
gaagattataataaaattaaaaaaaaattaaaatcatgtacagaaaagggtgaaggatca
ccatgtataaaagaatgtgtagatacatggataacagaaaaaaggaaagaatggaaaaca
ataaaagaacgttacgttgacaaatatacaaaagaaaatgatggttctaatgatttaact
acttttttacagcagggacccttttacagcttggttgaggaagccaaaaaagtggttaaa
tgtaaagacgaacaagaaaaattatggggatgtactggtaatactacaggtcatgcgcaa
gacaaatgtgagaatggggattttataacaaatttaatttctaaacttcaagaaaaaatt
agtgagtgtacatcccaatctagtggtagtgactgtaccctctccacagaaaacccctcc
accacccttgacgatgaggaaccccttgaagaggtagaccaaaacccagaggatgcacag
aagatgatacccaaaatttgtggagatgtgataccaaaagaggaagcgaaagaagaaggc
ggatgtacaccagacattaaaaaggaagaagaaaaaaaagaggaaaaaaaaaaacccgaa
caaactgcagaaaaaccagcagcagaaaccaaagccaaagaggaaaaacccgcccaagac
gaagccggacctccaccagcagatcccctccctgcgcgcgaacctttcgacccaactata
ctacaaacaaccattccttttggagttgcgttagcattaggatccattgcttttttattt
ttgaagaaaaaaactaaaagccctgtggaccttttcagtgttattaatatccccaaaagt
gattatgatataccgacaaaactttcacccaatagatatataccttatactagtggtaaa
tacagaggcaaacggtacatttaccttgaaggagatagtggaactgatagtggttacact
gatcattatagtgatattacttcatcttccgaaagtgagtatgaagaattggatattaat
gatatatatgcaccacgtgctcctaaatataaaactttgatagaagtagtactagaacct
agtggtaacaacacaacagctagtggtaacaacacaacagctagtggtaacaacacaaca
gctagtggtaaaaacacacctagtgatacacaaaatgatatacaaaatgatgatatacct
agtagtaaaattacagataatgagtggaatacattgaaacatgattttatatcacaatat
ctacaaagtgaacaaccaaatgatgtaccaaatgattatagtagtggtgatattccattg
aatacacaaccgaatactttatattttgataaacctgaagaaaagccttttattacttct
attcatgatagaaatttatatactggagaagaatatagttataatattaatatgagtact
aatagtatggatgatattccaattaatagtcataataatatttatagtggtatagattta
attaatgattcgttgaatagtaataatgttgatatatatgatgaagttttgaaaagaaaa
gaaaatgaattatttgggacaaatcatgtgaaacatactaatacacacaatgttaccaaa
tcaagtaatagtgatcctatagataatcagttggatttgttccatacgtggttagataga
catagagatatgtgcgagaagtggaataataaagaagaagtattaaataaattaaaagaa
gagtgggaaaatgagacacatagtggtaacactcacactagtgatagtaacaaaacgtta
aatactgatgtttctattcagatagatatggataatcctaaacctataaatcaatttact
aatatggatactatcttggaggatctggaaaaatataatgaaccttattatgatgtgcaa
gatgatatttattatgatgtacatgatcatgatacatcaactgtggatagtaataatatg
gatgttcctagtaaagtacaaattgaaatggatgtaaataccaaattggtgaaagagaaa
tatcctataggagatgtgtgggatatataa
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