Plasmodium falciparum 3D7: PF3D7_0409200
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Entry
PF3D7_0409200 CDS
T00095
Name
(RefSeq) protein SOF1, putative
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
pfa
Plasmodium falciparum 3D7
Brite
KEGG Orthology (KO) [BR:
pfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pfa03009
]
PF3D7_0409200
04121 Ubiquitin system [BR:
pfa04121
]
PF3D7_0409200
Ribosome biogenesis [BR:
pfa03009
]
Eukaryotic type
90S particles
Other 90S particles
PF3D7_0409200
Ubiquitin system [BR:
pfa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
PF3D7_0409200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Sof1
WD40_CDC20-Fz
WDR55
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_SCAP
KNTC1_N
Beta-prop_RSE1_2nd
WDR54
Motif
Other DBs
NCBI-GeneID:
812403
NCBI-ProteinID:
XP_001351406
PlasmoDB:
PF3D7_0409200
UniProt:
Q9U0J4
LinkDB
All DBs
Position
4:438887..440335
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AA seq
482 aa
AA seq
DB search
MEIKILHRNPEEYKNNKGTSNYKHVRSFDKKIHLFQREVEYKRALNATKMDKIFAKPLIK
CLDGHDDSIKSICVSNKNLSDLYSGSCNGIINMWNVLDKKLIKKIKAHDGFVRSLCMSYD
EKFLFSCGDDKYIKQWVIYKNKNINDIINEEQDNIHQEQNDITQQSNNIYEQKNDNQFHY
LEKEDVPKKIYVCKNVPNSIDKHFSENLIVSGSQTLDIWDYYRNNAISSFDYNNEYIYYV
KCNYSQTNLVGLTLSDNSIGIVDIRNKTPIKKLYLKYRSNSLSWNNMNPKQFVIANEDSN
LYSFDMRYLKTAYLVHKGFVNAVLDVDFSPIGNKFVACSYDKTVRLFNSDEPTSYDVYHT
KRMQHVLCCKFSQDAKYVFTGSSDMSLRIWKTISHEPSGILSNKEKQAINYRNKLKEKFA
SLKEIKRIRQHHHVPALIKSLSDKKKVMLEAKKRKEKNKIQHSKNPEQLPIPEKKKIFVT
EQ
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggagataaaaatattacatagaaacccagaggaatataaaaataataaggggacatca
aattacaaacatgtaagaagctttgataagaagattcatttatttcaaagagaagtagaa
tataagagagctctgaatgccaccaagatggataaaatatttgccaagcctttaattaaa
tgtttagatggacatgatgattctataaaaagtatttgtgtatcgaataaaaacttgagc
gatttatacagtggaagttgcaatggtataattaatatgtggaatgtactagataaaaaa
ttaataaaaaaaataaaagcacatgatggatttgttcgtagcctatgtatgagttatgat
gagaaatttttatttagttgtggtgatgacaaatatattaaacaatgggtaatttataaa
aataaaaatattaatgatataataaatgaagaacaagataatatacatcaagaacagaat
gacataacacaacaatcaaataatatatatgaacagaaaaatgataaccagtttcattat
ttagaaaaagaagatgtacccaaaaaaatttatgtttgtaaaaacgtgcctaatagtata
gataagcatttctcagaaaatcttattgtttcaggtagccaaactttagatatttgggat
tattatagaaataatgcaatatctagttttgattataacaatgaatatatatattatgta
aaatgtaattattcacaaaccaatttagtaggattaacactctccgacaattctataggt
atagtagatataagaaataaaacacctattaaaaaattatatctaaaatatagaagtaat
tcattaagttggaataatatgaatccaaaacaatttgttattgccaatgaagattctaat
ttatattcttttgatatgagatatttaaaaacagcttatctagtacataaaggttttgtt
aatgctgtgctagatgtagatttctcacctataggaaataaattcgttgcatgttcctac
gataagactgttaggttatttaattcagacgaacccacaagttatgatgtatatcatact
aaaagaatgcaacatgttttgtgttgtaaatttagtcaagatgccaaatatgtatttaca
ggtagtagtgatatgtccctacgcatatggaaaaccatttctcatgaaccctcaggaatt
ttatccaataaagaaaaacaagccattaattatcgaaataaattaaaagaaaaattcgca
tctttaaaagaaattaaaagaataagacaacatcatcatgtgccagccttaatcaaaagt
ttgtctgataaaaagaaggtcatgctcgaagcaaaaaagagaaaggaaaaaaacaaaata
caacattcaaaaaatccagagcagttacctattccggagaagaaaaaaatttttgtcaca
gagcaataa
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