KEGG   Plasmodium falciparum 3D7: PF3D7_0409200
Entry
PF3D7_0409200     CDS       T00095                                 
Name
(RefSeq) protein SOF1, putative
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
pfa  Plasmodium falciparum 3D7
Brite
KEGG Orthology (KO) [BR:pfa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pfa03009]
    PF3D7_0409200
   04121 Ubiquitin system [BR:pfa04121]
    PF3D7_0409200
Ribosome biogenesis [BR:pfa03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    PF3D7_0409200
Ubiquitin system [BR:pfa04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     PF3D7_0409200
SSDB
Motif
Pfam: WD40 Sof1 WD40_CDC20-Fz WDR55 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_RIG_2nd NBCH_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_SCAP KNTC1_N Beta-prop_RSE1_2nd WDR54
Other DBs
NCBI-GeneID: 812403
NCBI-ProteinID: XP_001351406
PlasmoDB: PF3D7_0409200
UniProt: Q9U0J4
LinkDB
Position
4:438887..440335
AA seq 482 aa
MEIKILHRNPEEYKNNKGTSNYKHVRSFDKKIHLFQREVEYKRALNATKMDKIFAKPLIK
CLDGHDDSIKSICVSNKNLSDLYSGSCNGIINMWNVLDKKLIKKIKAHDGFVRSLCMSYD
EKFLFSCGDDKYIKQWVIYKNKNINDIINEEQDNIHQEQNDITQQSNNIYEQKNDNQFHY
LEKEDVPKKIYVCKNVPNSIDKHFSENLIVSGSQTLDIWDYYRNNAISSFDYNNEYIYYV
KCNYSQTNLVGLTLSDNSIGIVDIRNKTPIKKLYLKYRSNSLSWNNMNPKQFVIANEDSN
LYSFDMRYLKTAYLVHKGFVNAVLDVDFSPIGNKFVACSYDKTVRLFNSDEPTSYDVYHT
KRMQHVLCCKFSQDAKYVFTGSSDMSLRIWKTISHEPSGILSNKEKQAINYRNKLKEKFA
SLKEIKRIRQHHHVPALIKSLSDKKKVMLEAKKRKEKNKIQHSKNPEQLPIPEKKKIFVT
EQ
NT seq 1449 nt   +upstreamnt  +downstreamnt
atggagataaaaatattacatagaaacccagaggaatataaaaataataaggggacatca
aattacaaacatgtaagaagctttgataagaagattcatttatttcaaagagaagtagaa
tataagagagctctgaatgccaccaagatggataaaatatttgccaagcctttaattaaa
tgtttagatggacatgatgattctataaaaagtatttgtgtatcgaataaaaacttgagc
gatttatacagtggaagttgcaatggtataattaatatgtggaatgtactagataaaaaa
ttaataaaaaaaataaaagcacatgatggatttgttcgtagcctatgtatgagttatgat
gagaaatttttatttagttgtggtgatgacaaatatattaaacaatgggtaatttataaa
aataaaaatattaatgatataataaatgaagaacaagataatatacatcaagaacagaat
gacataacacaacaatcaaataatatatatgaacagaaaaatgataaccagtttcattat
ttagaaaaagaagatgtacccaaaaaaatttatgtttgtaaaaacgtgcctaatagtata
gataagcatttctcagaaaatcttattgtttcaggtagccaaactttagatatttgggat
tattatagaaataatgcaatatctagttttgattataacaatgaatatatatattatgta
aaatgtaattattcacaaaccaatttagtaggattaacactctccgacaattctataggt
atagtagatataagaaataaaacacctattaaaaaattatatctaaaatatagaagtaat
tcattaagttggaataatatgaatccaaaacaatttgttattgccaatgaagattctaat
ttatattcttttgatatgagatatttaaaaacagcttatctagtacataaaggttttgtt
aatgctgtgctagatgtagatttctcacctataggaaataaattcgttgcatgttcctac
gataagactgttaggttatttaattcagacgaacccacaagttatgatgtatatcatact
aaaagaatgcaacatgttttgtgttgtaaatttagtcaagatgccaaatatgtatttaca
ggtagtagtgatatgtccctacgcatatggaaaaccatttctcatgaaccctcaggaatt
ttatccaataaagaaaaacaagccattaattatcgaaataaattaaaagaaaaattcgca
tctttaaaagaaattaaaagaataagacaacatcatcatgtgccagccttaatcaaaagt
ttgtctgataaaaagaaggtcatgctcgaagcaaaaaagagaaaggaaaaaaacaaaata
caacattcaaaaaatccagagcagttacctattccggagaagaaaaaaatttttgtcaca
gagcaataa

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